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Name : Varpa_2859 (Varpa_2859) Accession : YP_004155162.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : ssra-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 3067755 - 3068231 bp Length : 477 bp Strand : - Note : KEGG: vap:Vapar_2757 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein DNA sequence : ATGGCCACAAAGAAACAAGATACCTCCTCCCGCATTGCCGACAACAAGAAGGCCGCGTACAACTATTTCTTCGAAGAACG CTTCGAGGCCGGCATCGTGCTCGAGGGCTGGGAAGTCAAGTCGCTGCGCGAAGGCAAGGTGCAACTGACCGACGGCTACG TGGTGATCCGCGACGGCGAACTGTTCGTCGTGGGCCTGCAGATCAACCCGCTCAAGAGCGCTTCGACGCACGTCAACCCT GATTCGATCCGCACCAAGAAGTTGCTGCTGCACAAGGAAGAGATCCGCCGCCTCGTCGGCAAGGTCGAGCAGAAGGGCTA CACGCTGGTGCCGCTCAACCTGCACTGGAAGGCGGGCAAGGTCAAATGCGACATCGCGCTGGCCAAGGGCAAGGCCGAGC ACGACAAGCGCGACACCATCAAGGACCGCGAAGGCAAGCGCGAGGTCGAGCGCGCAATGAAGAGCCGCAGCCGCTAG Protein sequence : MATKKQDTSSRIADNKKAAYNYFFEERFEAGIVLEGWEVKSLREGKVQLTDGYVVIRDGELFVVGLQINPLKSASTHVNP DSIRTKKLLLHKEEIRRLVGKVEQKGYTLVPLNLHWKAGKVKCDIALAKGKAEHDKRDTIKDREGKREVERAMKSRSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-33 | 49 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 6e-24 | 43 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-26 | 42 |
