Gene Information

Name : Varpa_2674 (Varpa_2674)
Accession : YP_004154984.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2888805 - 2889659 bp
Length : 855 bp
Strand : +
Note : KEGG: vap:Vapar_2973 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGAGTGCCGTTCTGAAAGACATCCAACCCCGGGCCCAAGCCCAGGCCCAAGCTATTGCCGGCGGCGTGCGCCTCGAAGC
GCGCGGCCTGCACAAGCGCTATGGCACGCGAGACGTGCTGCGCAACACCAAGCTCACCATCGAGCCCGGCCAGTTCATCG
CCATCGTGGGGCGCAGCGGCTGCGGCAAGAGCACGCTGCTGCGGCTGATCGCGGGGCTCGAAGAAGCGACCTCCGGCGGT
CTCTACACCGATGGCAAGGCCGTGAACGGCCTGCACGACGACACCCGCATCATGTTTCAGGAGGCGCGCCTTCTGCCCTG
GCGCCGCGTGCTCGACAACGTGACGCTGGGTTTGTCGAACGACGCCAAGCCGCGCGGCAAGGAAGTGCTCGCGCAGGTCG
GCCTGGCCGACCGCGAGAACGAATGGCCGGCGCGCCTGTCGGGCGGACAGCGCCAGCGCGTGTCGCTTGCACGGGCGCTG
GTGCATCACCCGCGCCTGCTGCTGCTCGACGAGCCGCTGGGCGCGCTCGACGCGCTCACCCGCATCGAGATGCACCGGCT
CATCGAGAACCTCTGGCAGCGCCACCGCTTCACCGCCTTGCTGGTGACGCACGACGTGCAGGAAGCGGTGGCCCTGGCGA
ACCGCGTGATCCTGATCGAAGACGGCCGCATCGCGCTGGACGAAAACATCGCGCTCGCCCGCCCGCGCTCACAGGGCGAC
CCGGCCTTCGCAGCCATCGAAAAACGCATCCTCGACAGGGTGCTGCAAAAGCCCGGAACTCCCGAAGAGGTTGAGAGCAG
CGCCGACGCCAGCTGGCTTGGAACACCTGCGCATGCACTGCGCTGGGCGATCTGA

Protein sequence :
MSAVLKDIQPRAQAQAQAIAGGVRLEARGLHKRYGTRDVLRNTKLTIEPGQFIAIVGRSGCGKSTLLRLIAGLEEATSGG
LYTDGKAVNGLHDDTRIMFQEARLLPWRRVLDNVTLGLSNDAKPRGKEVLAQVGLADRENEWPARLSGGQRQRVSLARAL
VHHPRLLLLDEPLGALDALTRIEMHRLIENLWQRHRFTALLVTHDVQEAVALANRVILIEDGRIALDENIALARPRSQGD
PAFAAIEKRILDRVLQKPGTPEEVESSADASWLGTPAHALRWAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-39 50