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Name : Varpa_2659 (Varpa_2659) Accession : YP_004154969.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2874074 - 2874802 bp Length : 729 bp Strand : + Note : KEGG: vap:Vapar_2988 two component transcriptional regulator winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver DNA sequence : ATGGACACCCCCAAACGCGTGCTGATCGTCGAGGACGACGCCCACATCGCCGAACTGCTGCGCATGCACCTGCGCGACGA AGGCTATGCCATCGAACACGCCGCCGACGGCCATGCGGGCCTGCGCGAACTGGAGCGCGGCAACTGGGACGCGCTGGTGC TCGACCTGATGCTGCCCGGCGTCGACGGCCTCGAGATCTGCCGCCGAGCACGGGCCATGGCGCGCTACACGCCGATCATC ATCATCAGCGCACGCTCGAGCGAAGTGCACCGCATCCTCGGGCTGGAGCTGGGCGCCGACGACTACCTGGCCAAGCCTTT CTCGGTGCTGGAACTCGTGGCGCGCGTGAAGGCGCTGATGCGGCGCACCGATGCGCTGGCGCGCAATGCGCGCATGGAGT CGGGCAGCCTCACGCTGGGCAACCTGGACATCGAACCGCTGGCGCGCGAGGTGCGCGTGGACGGCAAGCTCATCGAGCTC ACGCCGCGCGAGTTCGACCTGCTGTACTTCTTTGCGCGCAACCCCGGCAAGGTGTTCTCGCGGCTCGACCTGCTCAACCA GGTGTGGGGCTACCAGCACGACGGCTACGAGCACACGGTCAACACGCACATCAACCGGCTGCGCACGAAGGTGGAGACCG ATCCGGCGGAGCCGAGGCGCATCCTTACCGTGTGGGGGCGGGGCTACAAGCTTTCGCCGACCGGCGCGGGCGATGAGGGA GGGGCGTGA Protein sequence : MDTPKRVLIVEDDAHIAELLRMHLRDEGYAIEHAADGHAGLRELERGNWDALVLDLMLPGVDGLEICRRARAMARYTPII IISARSSEVHRILGLELGADDYLAKPFSVLELVARVKALMRRTDALARNARMESGSLTLGNLDIEPLAREVRVDGKLIEL TPREFDLLYFFARNPGKVFSRLDLLNQVWGYQHDGYEHTVNTHINRLRTKVETDPAEPRRILTVWGRGYKLSPTGAGDEG GA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-71 | 61 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-72 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 3e-39 | 46 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | AF155139.2.orf0.gene | Protein | 2e-42 | 43 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | HE999704.1.gene1528. | Protein | 3e-34 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | FJ349556.1.orf0.gene | Protein | 2e-38 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_012469.1.7686381. | Protein | 1e-42 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 4e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 4e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 4e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 5e-43 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | NC_012469.1.7685629. | Protein | 3e-42 | 42 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | AE016830.1.gene1681. | Protein | 1e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | VFG1563 | Protein | 8e-72 | 61 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | VFG1702 | Protein | 2e-72 | 61 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 2e-32 | 43 |
| Varpa_2659 | YP_004154969.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 2e-37 | 41 |
