Gene Information

Name : Varpa_2653 (Varpa_2653)
Accession : YP_004154963.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : class ii aldolase/adducin family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 2869817 - 2870515 bp
Length : 699 bp
Strand : +
Note : PFAM: class II aldolase/adducin family protein; KEGG: dfe:Dfer_2396 class II aldolase/adducin family protein

DNA sequence :
ATGACGCTGCATAAAGAACTCAAGCGCGAGGCCTACGAGGCCAACCTGGAAATCCCGAAGCAGGCGCTGGCGCTGTACAC
CTTCGGCAACGTGAGCGCCTTCGATGCGCGGCAGGGCGTCTTCGCGATCAAGCCCAGCGGCATGCCCTACGACGAGATGA
CGGCCGACGACATGGTGGTGGTCGACCTCGATGCGCGCGTGGTCGAAGGCACCCTGCGGCCCTCGAGCGACACCAAGACC
CATGCGGTGCTCTACCGCGCCTTCGAAGGCATCGGCGGCGTCTGCCACACGCACTCGGTGCATGCCGTGGCGTGGGCGCA
GGCGCGGCGCGCCATCCCAATCTACGGCACCACGCATGCGGACCACCTCACGGTGGCGGTGCCGGTCACCGAGGTCATCA
GCGACGAGGCCGTGGCGCGCGACTACGAGGAGGAAACCGGCCACCAGATCGTGCGGCGGATGCAGGGCATCTCGCCGCAG
GAGGTCGAGATGATCGTGGTGTCGTGCCACGGGCCGTTCACCTGGGGCAAGAACGCGATGAAATCCGTGTACAACGCTCG
CGTGCTCGAGGAGCTGGCGCAAATGGCCTACCTCACGCAGTCGATCGACCCGCTGGCGCGCGAATTGCCGCCCGCCGTGA
TCCGCAAGCACTACGAACGCAAGCATGGTGCCGGCGCCTACTATGGGCAGGCCCGATAG

Protein sequence :
MTLHKELKREAYEANLEIPKQALALYTFGNVSAFDARQGVFAIKPSGMPYDEMTADDMVVVDLDARVVEGTLRPSSDTKT
HAVLYRAFEGIGGVCHTHSVHAVAWAQARRAIPIYGTTHADHLTVAVPVTEVISDEAVARDYEEETGHQIVRRMQGISPQ
EVEMIVVSCHGPFTWGKNAMKSVYNARVLEELAQMAYLTQSIDPLARELPPAVIRKHYERKHGAGAYYGQAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-44 48