Gene Information

Name : Varpa_2637 (Varpa_2637)
Accession : YP_004154947.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 2852621 - 2853499 bp
Length : 879 bp
Strand : +
Note : PFAM: polysaccharide deacetylase; KEGG: dac:Daci_2092 polysaccharide deacetylase

DNA sequence :
ATGACCAAGGAAATCTTCGTAACGTTCGGAGTCGACGTGGACGCCGTCGGCGGCTGGCTCGGTTCGTATGGCGGCGAGGA
CTCGCCCGACGACATCTCTCGCGGCATGTTCGCCGGCGAGGTGGGCTCGCCGCGTTTGCTGAAGATGTTCAAGAAGTACG
GCCTGACCACCACGTGGTTCGTGCCTGGCCACTCGGCCGAGACCTTTCCCGATCAGATGAAGGCCGTGGTCGACGCCGGC
CACGAGCTGGGCATTCACGGCTACAGCCACGAGAACCCGATCGCGATGACGCCCGAGCAGGAAGAGGCCGTGCTCGACAA
GAGCATCGACGTCATCACCCGGCTCGCGGGCAGGGCGCCGACCGGCTACGTGGCGCCATGGTGGGAGTTCAGCCCCATCA
CCAACGAGCTGCTCATCAAGAAGGGCATCAAGTACGACCACAGCCTGATGCACAACGACTTCCATCCGTACTACGTGCGC
GTGGGCGACAAGTGGACCCGCATCGACTACAGCAAGCACCCGGACACGTGGATGAAGCCGCTGGAGCGCGGCACCGAAAC
CTCGCTGGTCGAGATCCCGGCCAACTGGTACCTGGACGACCTGCCGCCGATGATGTTCATCAAGAAGTCGCCCAACAGCC
ACGGCTTCGTGAACCCGCGCGACATCGAGCAGATGTGGCGCGACCAGTTCGACTGGGTCTACCGCGAGCACGACTACGCG
GTGTTCCCGATCACGATCCATCCCGACGTGTCCGGCAGGCCGCAGGTGCTGCTGATGCTCGAACGGCTGATCGAGCATTT
CAAGGCCCACGACGGCGTGCGCTTCATGACCTGCGACCAGATCGCGGACGACTTCCTGCGCCGCAGTCCGCGCGGATGA

Protein sequence :
MTKEIFVTFGVDVDAVGGWLGSYGGEDSPDDISRGMFAGEVGSPRLLKMFKKYGLTTTWFVPGHSAETFPDQMKAVVDAG
HELGIHGYSHENPIAMTPEQEEAVLDKSIDVITRLAGRAPTGYVAPWWEFSPITNELLIKKGIKYDHSLMHNDFHPYYVR
VGDKWTRIDYSKHPDTWMKPLERGTETSLVEIPANWYLDDLPPMMFIKKSPNSHGFVNPRDIEQMWRDQFDWVYREHDYA
VFPITIHPDVSGRPQVLLMLERLIEHFKAHDGVRFMTCDQIADDFLRRSPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 2e-120 81