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Name : Varpa_2624 (Varpa_2624) Accession : YP_004154935.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2839628 - 2841505 bp Length : 1878 bp Strand : - Note : TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vap:Vapar_3002 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase DNA sequence : ATGTCTTCCCCTGCCCTCAATCTGCCGGACGGCCGCGTTCTCGCCGTCGACGACCTCACGGTGCGCTTCTCGACTTCCGA GCGCACCGTCGATGCCGTCAAGCACCTGTCCTTCCACGTCGACCATGGCGAAACGCTCGCGGTGGTGGGCGAATCGGGCT CGGGCAAATCGGTCACCTCGCTCGCGTTGATGCGGCTTGTGGAACACGGCGGCGGGCGCATCCTCGGCGGCAGCATGGCG TTTCGCCGCCGCAATGGCGAAGTGCTCGACCTCGCGCAGGCGCGCGACAGCACGATGCGCGGCATCCGCGGTGCGGACAT CGCGATGATTTTTCAGGAGCCGATGACGTCGCTGAACCCGGTGTTCACGGCAGGCGACCAGATCGCCGAGGCCATCCGCA TCCACCAAGGCAAGAGCAACGCGGCCGCGCGCGCCGAGGCACTGCGCATGCTCGAACTCGTGCGCATTCCCGAAGCGCGC AATGTGCTCGACCGCTTTCCGCATCAGCTCTCGGGCGGCATGCGCCAGCGCGTGATGATCGCGATGGCGCTCTCCTGCAA GCCGCAGTTGCTGATCGCCGACGAGCCCACCACCGCGCTCGACGTGACGATCCAGGCGCAGATTCTTCAGCTCATCCGCG AGCTGCAGAAGGAGATGCGCATGGGCGTGCTCTTCATCACGCACGACATGGGCGTGGTGGCCGAAATTGCCGACCGCGTG CTCGTGATGTACCGCGGCGACAAGGTAGAAGCGGGCGCCTCCGAAACCGTGTTCGCCGCACCGCAGCACCCGTACACCAA GGCGCTGCTGTCGGCCGTGCCCAAGCTCGGCGCGATGCAGGGCACGGACCTGCCGGCCAAGTTCGAACTGCTGCGCACCG AAGGCACGCCCGAGGCGGTGCCCTCCACACCCACCACGCCGCAGACCACCGTGCGCGACGACGCCGGCCCGATCCTGCGC GTGCGCGACCTCGTGACGCGCTTCGACGTGCGCAGCGGCATCTTCGGCCGCGTGAAGCGCCGCGTGCATGCGGTGGAAAA GATCAGCTTTGATCTCTACCCCGGCGAGACGCTGGCGCTGGTCGGCGAGTCGGGCTGCGGCAAGTCGACCACGGGCCGCT CGCTGCTGCGCCTGGTCGAAAGCCAGAGCGGCGCCATCGAGTTCGGCGGGCAAAACATCCGCGAACTCCCCACGCGCGAA CTGCAGGCGCTGCGCCGGAACATCCAGTTCATCTTCCAGGACCCGTTCGCTTCGCTCGATCCGCGCGTGACGGTGGGCTT CTCGATCATGGAGCCGCTGCTGATCCACAACATCGCCAAGGGCGCCGAGGCGCAGCAGCGCGTCGACTGGCTCCTGCAGA AGGTCGGCTTGCCGCCTGAAGTAGCGCAGCGCTATCCGCACGAGTTCTCGGGCGGGCAGCGGCAACGCATCGCGATTGCG CGCGCGCTTGCGCTCAACCCGAAGGTGGTGGTGGCGGACGAATCGGTGTCGGCGCTGGACGTGTCCATTCAGGCGCAGAT CGTCAACCTCATGCTCGACCTGCAGCGCGAACTGGGCGTCGCGTTCCTTTTCATCTCGCACGATATGGCGGTGGTCGAGC GCATCAGCCACCGCGTGGCCGTGATGTACCTCGGCCAGATCGTGGAAATCGGCCCGCGCCGCGCGGTGTTCGAAGCGCCG CAGCACGCCTACACCCGCAAGCTGATGGCCGCGGTGCCGGTGGCCGACCCGTCGCGCCGCCACAAGCCGCGCGCGCTGCT CGAAGGCGAGATCCCGAGCCCCATCCGCGCGGTGGGCGACGAGCCCGATGTGCCGCCGCTGGTGCAGGTCGCGCCCGGGC ATTTCGTTGCACGCCACGCGATTGGCGGCGCCTTCTGA Protein sequence : MSSPALNLPDGRVLAVDDLTVRFSTSERTVDAVKHLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGGRILGGSMA FRRRNGEVLDLAQARDSTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAIRIHQGKSNAAARAEALRMLELVRIPEAR NVLDRFPHQLSGGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRV LVMYRGDKVEAGASETVFAAPQHPYTKALLSAVPKLGAMQGTDLPAKFELLRTEGTPEAVPSTPTTPQTTVRDDAGPILR VRDLVTRFDVRSGIFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTTGRSLLRLVESQSGAIEFGGQNIRELPTRE LQALRRNIQFIFQDPFASLDPRVTVGFSIMEPLLIHNIAKGAEAQQRVDWLLQKVGLPPEVAQRYPHEFSGGQRQRIAIA RALALNPKVVVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEAP QHAYTRKLMAAVPVADPSRRHKPRALLEGEIPSPIRAVGDEPDVPPLVQVAPGHFVARHAIGGAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-90 | 41 |
