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Name : Varpa_0247 (Varpa_0247) Accession : YP_004152580.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : 5-carboxymethyL-2-hydroxymuconate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 261857 - 263323 bp Length : 1467 bp Strand : - Note : KEGG: vap:Vapar_0243 5-carboxymethyL-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyL-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase DNA sequence : ATGCAACAGATCAACCACCTCATCGGCGGCAAGTCCGTCACGGGCAAGGACTACTTCGAAACCGTCAACCCGGCCACGCA GGAGGTGCTGGCCGAGGTCGCCTCGGGCGGCGAAGCCGAGGTGAACGCGGCTGTCGCCGCGGCGAAGGAAGCATTCCCGA AATGGGCCGGCATGCCCGCGCCCGAACGCGCGAAGCTCATCCGCAAGCTCGGCGACCTGATCGCCGCGCACGTGCCCGAG ATCGCGCAGACCGAGACCAACGACTGCGGCCAGGTCATCGCGCAAACGGGCAAGCAGCTCATTCCGCGCGCGGCCGACAA CTTCTACTACTTCGCCGAGATGTGCACGCGCGTGGACGGCCACACCTACCCCACGCCGACGCACCTGAACTACACGCTGT TCCACCCGGTGGGCGTGTGCGCGCTCATCAGCCCGTGGAACGTGCCGTTCATGACGGCCACCTGGAAGGTCGCGCCGTGC CTGGCCTTCGGCAACACCGCGGTGCTGAAGATGAGCGAGCTCTCGCCGCTCACGGCCGCGCGCCTGGGTGAACTCGCGCT CGAAGCCGGCATTCCGCCCGGTGTGCTGAACCTCGTGCATGGCTACGGCAAGGAAGCCGGCGAGCCGCTGGTCGCGCACC CCGATGTGCGCGCGATTTCGTTCACCGGTTCCACCGCCACGGGCAACCGCATCGTGAAGAGCGCGGGCCTCAAGAAGTTC AGCATGGAGCTGGGCGGGAAAAGTCCGTTCGTGATCTTCGAGGATGCCGACCTCGACCGCGCGCTCGACGCGGCCGTGTT CATGATCTTCAGCAACAACGGCGAGCGCTGCACGGCGGGCTCGCGCATCCTGGTGCAGCAGTCGATTTACGCCGACTTCG CCGCGAAGTTCGCCGAGCGCGCCAAGCGCATCACGGTGGGCGACCCGCTCGACGAGAAGACCATCGTCGGCCCGATGATT TCGCAGGCCCACCTGGCCAAGGTGCGCAGCTACATCGAACTGGGTCCGAAGGAAGGTGCGACGCTGTTGTGCGGCGGCCT CGATGCGCCCTCGAACCTGCCCGACCGCGTTCAGCGCGGCAACTACGTGATGCCCACCGTCTTCGCCGACGTCGACAACC GCATGAAGATTGCGCAGGAAGAAATCTTCGGCCCGGTCGCGTGCCTCATCCCGTTCAAGGACGAGGCCGATGCGATTCGC CTCGCCAACGACATCCAGTACGGCCTCTCGAGCTACGTCTGGACCGAGAACATCGGCAAGGCGCACCGCGTGGCCGCTGC CGTGGAAGCCGGCATGTGCTTCGTCAACAGCCAGAACGTGCGCGACCTGCGCCAGCCCTTCGGCGGCACCAAGGCTTCGG GCACCGGCCGCGAAGGCGGCACCTGGAGTTATGAAGTGTTCTGCGAGCCGAAGAACGTCGCGGTGTCGATGGGCTCGCAC CACATTCCGCACTGGGGCGTGGCGTGA Protein sequence : MQQINHLIGGKSVTGKDYFETVNPATQEVLAEVASGGEAEVNAAVAAAKEAFPKWAGMPAPERAKLIRKLGDLIAAHVPE IAQTETNDCGQVIAQTGKQLIPRAADNFYYFAEMCTRVDGHTYPTPTHLNYTLFHPVGVCALISPWNVPFMTATWKVAPC LAFGNTAVLKMSELSPLTAARLGELALEAGIPPGVLNLVHGYGKEAGEPLVAHPDVRAISFTGSTATGNRIVKSAGLKKF SMELGGKSPFVIFEDADLDRALDAAVFMIFSNNGERCTAGSRILVQQSIYADFAAKFAERAKRITVGDPLDEKTIVGPMI SQAHLAKVRSYIELGPKEGATLLCGGLDAPSNLPDRVQRGNYVMPTVFADVDNRMKIAQEEIFGPVACLIPFKDEADAIR LANDIQYGLSSYVWTENIGKAHRVAAAVEAGMCFVNSQNVRDLRQPFGGTKASGTGREGGTWSYEVFCEPKNVAVSMGSH HIPHWGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 7e-146 | 69 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 5e-55 | 42 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-54 | 41 |
