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Name : Varpa_2345 (Varpa_2345) Accession : YP_004154658.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2547391 - 2548065 bp Length : 675 bp Strand : - Note : KEGG: vap:Vapar_3285 two component transcriptional regulator winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver DNA sequence : GTGCGCATATTGCTCGTCGAAGATGACACTTCCTTGGCAGACGCCGTGTGCAGCTATCTGCTGGCCAAGGCTTTCGTCGT CGACGTGGCGCCCAGCCTCGCCGAGGCACGCGGCGCCCTGCTCTCGGTGCAGTACGCCGCGGTGCTGCTCGACCTGCACC TGGGCGACGGCGACGGCCTCTCGCTGCTGCCGCAGGTGCGCGCGCTGCGCGAGCCCCCCATCGTCATCGTGCTCACGGCC CGCGACCAGGTCACCGACCGCATCCGCGGGCTCGACGCGGGCGCCGACGACTACCTCATCAAGCCTTACGACCCCGCCGA ACTGCTGGCGCGGCTGCGCGCGGTCGAGCGGCGGCGCAGCGCCAACACATCGCCCGTTCTGCACTTCGGCACGCTGGAGA TCGACCTGGCCCACGACCGCGTGCGCAAGGACGGCACCCCCGTCGTGCTCACGCAAAAGGAATGGGCCCTGCTGCGCGTG ATGGCCACGCGCCCCGAGCGCATCCACACGCGCGAGAACCTCGCCGACGCACTCTACGGCTTCGGCGACGAGGCCGACAG CAACACGCTCGAAGTCTTCATCAGCCGCCTGCGCCGCAAGCTCGGCAAGAGCCATATCCAGACGCTGCGGGGCCTCGGCT ACCGGCTGTCGTTCTCGGCGGACGACGAGGAATGA Protein sequence : MRILLVEDDTSLADAVCSYLLAKAFVVDVAPSLAEARGALLSVQYAAVLLDLHLGDGDGLSLLPQVRALREPPIVIVLTA RDQVTDRIRGLDAGADDYLIKPYDPAELLARLRAVERRRSANTSPVLHFGTLEIDLAHDRVRKDGTPVVLTQKEWALLRV MATRPERIHTRENLADALYGFGDEADSNTLEVFISRLRRKLGKSHIQTLRGLGYRLSFSADDEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 4e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_2345 | YP_004154658.1 | winged helix family two component transcriptional regulator | VFG0473 | Protein | 2e-22 | 41 |
