Gene Information

Name : Varpa_2221 (Varpa_2221)
Accession : YP_004154538.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 2414435 - 2415934 bp
Length : 1500 bp
Strand : -
Note : KEGG: vap:Vapar_3399 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like

DNA sequence :
ATGACGACTACCTACCTCCTCGCCCTGGACCAGGGCACCTCCAGCTCCCGCAGCATCGTCTTCGACCGCGAAGGCCACAT
CGTCGCCATCGCGCAGAAGGAGCTCACCCAGATCTACCCGCAGCCCGGCTGGGTCGAGCACGACCCGATGGAAATCTGGC
GCAGCCAGCTCGCCACCGCGCGCGAAGTGCTCGTGAAGGCGAAGCTCAAGCCCACCGACATCCACGCCATCGGCATCACC
AACCAGCGCGAGACCACCGTGCTGTGGAACCGAAAGACCGGCCAGCCGGTGCACCACGCCATCGTCTGGCAGGACCGCCG
CGCCGAGCCCCTGTGCGCGCAGTTGCGCGACGAAGGCATGACGGACACGATCCGCGAGAAGACCGGCCTCGTGATCGACG
CGTACTTCTCCGGCACCAAGCTGCGCTGGCTGCTCGACAACGTGCCCGGCGCCCGCGCCGAGGCCGAGCGCGGCGAGCTG
GCCTTCGGCACCGTCGACAGCTGGCTCATGTGGCAGCTCACCGGCGGCAAGGTGCATGTGACCGACGTGAGCAACGCCTC
GCGCACCATGCTCTTCAACGTGCACACGAACGAGTGGGACGCCGACCTGCTCGCCGCGCTGAAGATTCCCGCCGCGCTGT
TGCCCAAGGTGCAGCCTTCGAGCTCGCACTTCGTCGACACCGATGCCGCGCTCCTCGGCCACAGCCTGCCCGTGGGCGGC
GTGGCGGGCGACCAGCAGAGTGCCCTCTTCGGCCAGGCCTGCTTCGAGGCCGGCATGGCCAAGAACACCTATGGCACCGG
CTGCTTTTTGCTGATGCACACGGGCGCCGCATTCCAGCCCTCGCACAACGGCCTGCTCGTGACGAGCGCCGCGCAGGTCG
ATGCGACGCCGCAGTACGCGATGGAAGGCAGCGTGTTCGTCGGCGGCGCCGTCGTGCAGTGGCTGCGCGACGGGCTCAAG
GCGATCAAGGGCAGCGCGGAAGTGCAGTCATTGGCCGAGAGCGTGCCCGATGCGGGCGGCGTGATGATGGTGCCGGCCTT
CACCGGCCTCGGCGCGCCCTACTGGGATGCCGATGCGCGCGGCACGATCACCGGCCTTACGCGCGGCACGACCGTCGCGC
ACATCGCGCGTGCCGCGCTCGAAAGCATCGCGTACCAGAGCGCCGCGCTGCTGCAGGCGATGAGCCGCGATGCGGTGGCC
GCGGGCGGCAAGCCGGTCGCCGAGCTGCGCGTGGACGGGGGCGCGAGCGTCAACGACCTGCTGATGCAGTTTCAGGCCGA
CCTGCTGGGCATTCCGGTGGTGCGGCCCGAAGTCATCGAGACCACCGCGCTCGGCGCTGCGTACCTCGCGGGGTTGTCGA
CCGGCGTCTACACCGATGCGCGCCAACTCTCGAAGCTCTGGAAGGTGGAGCGCCGCTTCCTGCCGACGATGGGCCGCGCG
CAGGCCGAGGAATCGATGGCGCGCTGGGAGCGCGCCGTGCGTCAGGCCACGGCGACCTGA

Protein sequence :
MTTTYLLALDQGTSSSRSIVFDREGHIVAIAQKELTQIYPQPGWVEHDPMEIWRSQLATAREVLVKAKLKPTDIHAIGIT
NQRETTVLWNRKTGQPVHHAIVWQDRRAEPLCAQLRDEGMTDTIREKTGLVIDAYFSGTKLRWLLDNVPGARAEAERGEL
AFGTVDSWLMWQLTGGKVHVTDVSNASRTMLFNVHTNEWDADLLAALKIPAALLPKVQPSSSHFVDTDAALLGHSLPVGG
VAGDQQSALFGQACFEAGMAKNTYGTGCFLLMHTGAAFQPSHNGLLVTSAAQVDATPQYAMEGSVFVGGAVVQWLRDGLK
AIKGSAEVQSLAESVPDAGGVMMVPAFTGLGAPYWDADARGTITGLTRGTTVAHIARAALESIAYQSAALLQAMSRDAVA
AGGKPVAELRVDGGASVNDLLMQFQADLLGIPVVRPEVIETTALGAAYLAGLSTGVYTDARQLSKLWKVERRFLPTMGRA
QAEESMARWERAVRQATAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 4e-88 49