Gene Information

Name : Varpa_2141 (Varpa_2141)
Accession : YP_004154459.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : phosphonate ABC transporter inner membrane subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3639
EC number : -
Position : 2326630 - 2327451 bp
Length : 822 bp
Strand : +
Note : KEGG: ppg:PputGB1_3257 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component

DNA sequence :
ATGATCGCCATCGGACGCTACAACCTGTTGGTCGCCAAGAGCGGCGGCAACCCGGGCTGGTGGAAGTACGCCCTCGTCGG
CCTGGCTGCGCTGGGCGTGATGTGGTGGGCCGCCATCGGCAGCCAGGTGAGCTTCAGCGAGCTGGCCAAGGGCATGCCGT
GGATCGCCGACTTCCTCGGCCGCATGCTGCCGCCCAACTGGGAGTTCATGCAGCGGCTGGTGAAGCCGGCCATCGAGACG
GTGCAGATCGCGCTCTGGGGCACGCTGCTGTCGGTGATTCTTGCGGTGCCGCTGTGCTTCTTCGCGGCGCGCAACATCTC
GCCGAACATCGCGGTGTTCCATGCGATGCGGCAGGTGCTGAACATCACGCGCGGCATCAACGAGATCATCCTCGCGCTGA
TCTTCGTGGCGGCCGTGGGCCTCGGGCCATTCCCCGGCGTGCTGGCCCTGGCGCTGCACGGCGCGGGCATGCTCGGCAAG
TTCTTCGCGGAGTCGATCGAGGAGATCGACCAAGGTCCGCTCGAAGCATTGCGCGCCACCGGCGCCGGGCCCATCCAGAC
CATCATCTTCGGCGTGATCCCGCAGGTCGTGACCGCGTGGATCGGCGTCATCGTCTACCGCTTCGAGACCAACCTGCGCC
AGGCCACGGTGCTGGGCATGGTGGGCGCGGGCGGCATCGGCTTCGAACTGGTGGGGAGCATGAAGCTCTTCCAGTACCAG
GACACCGCGACCTGCATCCTGGTGATCGTCGTCATGGTGATGACGGCCGACTACCTGTCGACCAAGTTGCGCGCATGGAT
TCAACAAGGAGCGCATCAATGA

Protein sequence :
MIAIGRYNLLVAKSGGNPGWWKYALVGLAALGVMWWAAIGSQVSFSELAKGMPWIADFLGRMLPPNWEFMQRLVKPAIET
VQIALWGTLLSVILAVPLCFFAARNISPNIAVFHAMRQVLNITRGINEIILALIFVAAVGLGPFPGVLALALHGAGMLGK
FFAESIEEIDQGPLEALRATGAGPIQTIIFGVIPQVVTAWIGVIVYRFETNLRQATVLGMVGAGGIGFELVGSMKLFQYQ
DTATCILVIVVMVMTADYLSTKLRAWIQQGAHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13522.1 phosphite transport system permease protein Not tested PAGI-7 Protein 3e-36 47