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Name : Varpa_2137 (Varpa_2137) Accession : YP_004154455.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : tyrosine recombinase xerd Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2322879 - 2323790 bp Length : 912 bp Strand : + Note : KEGG: vap:Vapar_3458 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein DNA sequence : ATGACCGAGGCCGCCGCAGCACCCACCCCTGAAATCGACGAGTTCATCGACGCCCTCTGGCTCGAGGACGGGCTCTCGAA GAACACGCTGGCCGCGTACCGCCGCGACCTCGCGCTGTTCTCGCAATGGCTGGGCAAGCAGCGCAGCGGCATTGCGCTCG ATACGGCGCAGGAGTCCGACGTGCAGGCCTACATGGGCGTGCGCCTCTCGACCAAGGGCAAGGCCACCTCGGCCAACCGG CGGCTCACCGTGTTCAAGCGCTACTACCGATGGGCGCTGCGCGAACGCCGCATCACGGCGGACCCGACGATCCGGCTCGC GCCTGCGCGGCAGATGCCCCGTGCCATCAAGACGCTGTCGGAGAAACAGGTCGACGATCTGCTGGCCGCGCCGGATGTCG AGACGCCGTTGGGCCTTCGTGACCGCGCGATGCTCGAGGTGATGTATGCCAGCGGCCTGCGCGTGAGCGAGTTGGTGGCG CTCAAGGTCATCGACATGAGCCTCAACGACGGCGTGCTGCGCGTGCTCGGCAAGGGCAACAAGGAGCGGCTCGTGCCCTT CGGCGGCGAGGCGCGGCGCTGGATCGAGCGCTACCTCGAGGAGTCGCGCCCGGTCATCCTCGATGGACAGCAGACGCCCG ATCTCTTCGTGACCGCACGCGGCGCGGGCATGACGCGCGTGATGTTCTGGATCATCGTGAAGAAGCAGGCCGCGGCTGCG GGCATCCATGTGCCGCTGTCGCCGCACACGCTGCGGCACGCCTTCGCCACGCACCTCTTGAACCACGGCGTGGACCTGCG CGCGGTGCAACTGCTGCTCGGCCATGCCGACATATCAACGACCACCATCTACACGCACGTGGCGCGCGAACGCCTGAAGC AACTGCACGCGGCGCACCATCCGCGCGGTTGA Protein sequence : MTEAAAAPTPEIDEFIDALWLEDGLSKNTLAAYRRDLALFSQWLGKQRSGIALDTAQESDVQAYMGVRLSTKGKATSANR RLTVFKRYYRWALRERRITADPTIRLAPARQMPRAIKTLSEKQVDDLLAAPDVETPLGLRDRAMLEVMYASGLRVSELVA LKVIDMSLNDGVLRVLGKGNKERLVPFGGEARRWIERYLEESRPVILDGQQTPDLFVTARGAGMTRVMFWIIVKKQAAAA GIHVPLSPHTLRHAFATHLLNHGVDLRAVQLLLGHADISTTTIYTHVARERLKQLHAAHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 2e-57 | 53 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 2e-57 | 53 |
