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Name : Varpa_2093 (Varpa_2093) Accession : YP_004154411.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 2277572 - 2278906 bp Length : 1335 bp Strand : + Note : KEGG: vap:Vapar_1831 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino aciD-binding ACT domain protein DNA sequence : ATGAAACCCATCCAAGTAGGCCTCCTCGGCGCAGGCACGGTCGGCAGCGGCACCTTCAAGGTGCTCCAGCGCAACCAGGA AGAAATCAAGCGCCGCGCCGGCCGCGGCATCGAGATCACCATGGTGGCCGACCTGGACACCGCCCGCGCCCGCAACGTGG CTGGCGAAGGGGCCGGCGAAGGCGTCAAGGTGGTGGCCGATGCGCGCGAGATCATTGCCAACCCCGACATCGACATCGTC ATCGAGCTGATCGGCGGCTACGGCGTCGCGAAGCAACTGGTGCTCGAAGCCATTGCAGCCGGCAAGCACGTGGTCACCGC CAACAAGGCGCTGCTCGCGGTGCACGGCACCGAGATCTTCGCGGCTGCGCACGCCAAGGGCGTGATGGTGGCTTTCGAAG CGGCTGTTGCCGGCGGCATCCCGATCATCAAGGCGCTGCGCGAAGGCCTCACGGCCAACAGCATCCAGTGGCTGGCCGGC ATCATCAACGGCACCACGAACTTCATCCTCTCCGAGATGCGCGACAAGGGCCTGGACTTCGCCACCGTGCTGAAGGAAGC CCAGCGCCTCGGCTACGCCGAAGCCGACCCGACCTTCGACATCGAAGGCGTCGACGCCGGCCACAAGGTCACGCTGATGA GCGCCATCGCCTTCGGCATCCCGGTGCAGTTCGACAAGGCGCACATCGAGGGCATCACCAAGCTCGCCGCGCAGGACATC AAGTACGCCGAGCAGCTCGGCTACCGCATCAAGCTCCTGGGCATCACCAAGCGCACGGCCAAGGGCATCGAGCTGCGCGT GCACCCGTCGCTGGTGCCGTCCAAGCGCCTGCTGGCGAACGTCGAAGGCGCGATGAACGCGGTTGTCGTGCACGGCGACG CCGTCGGCACCACGCTCTACTACGGCAAGGGCGCCGGCAGCGAGCCGACCGCGAGCGCCGTGATCGCCGACCTGGTCGAC ATCACCCGCCTGCACACGGCCGATGCCGCGCACCGAGTGCCGCACCTGGCCTTCCATCCCGACGCGATGAGCGACCTCAA GGTGCTGCCGATGGCCGAGGTGGTCACCAGCTATTACCTGCGCCTGCGCGTGGCCGACCAAGCCGGCGTGCTCGCCAAGG TGACGGGCCTGTTGGCCACCGCCGGCATCAGCATCGACGCCGTGCTGCAGCGCGAAGCCGACGAGGTGGGCGGCGAGGGC TCCACGCAAACCGACCTCATCATCCTCACGCACGACGCGCGCGAAGGCACCGTCGACGGCGTGCTGGCCGAGCTGCAGGC GCTGCCTACCGTGCTCGAACCCATCGTGCGCATCCGCAAGGAAGAGTTGAAGTGA Protein sequence : MKPIQVGLLGAGTVGSGTFKVLQRNQEEIKRRAGRGIEITMVADLDTARARNVAGEGAGEGVKVVADAREIIANPDIDIV IELIGGYGVAKQLVLEAIAAGKHVVTANKALLAVHGTEIFAAAHAKGVMVAFEAAVAGGIPIIKALREGLTANSIQWLAG IINGTTNFILSEMRDKGLDFATVLKEAQRLGYAEADPTFDIEGVDAGHKVTLMSAIAFGIPVQFDKAHIEGITKLAAQDI KYAEQLGYRIKLLGITKRTAKGIELRVHPSLVPSKRLLANVEGAMNAVVVHGDAVGTTLYYGKGAGSEPTASAVIADLVD ITRLHTADAAHRVPHLAFHPDAMSDLKVLPMAEVVTSYYLRLRVADQAGVLAKVTGLLATAGISIDAVLQREADEVGGEG STQTDLIILTHDAREGTVDGVLAELQALPTVLEPIVRIRKEELK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 6e-111 | 56 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 6e-111 | 56 |
