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Name : Varpa_2092 (Varpa_2092) Accession : YP_004154410.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : class I and II aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : - Position : 2276246 - 2277478 bp Length : 1233 bp Strand : + Note : PFAM: aminotransferase class I and II; KEGG: vap:Vapar_1830 aminotransferase AlaT DNA sequence : TTGAAGCAGCTCAAGAAATCGGCCAAGCTGGCCAACGTTCTCTACGACATCCGTGGTCCCATCATGGACGCGGCCAAGCA GATGGAGGACGACGGCCAGAAGATCATCAAGCTCAATATCGGCAATCTCGCCGTGTTCGGCTTCGATGCGCCCGAGGAGA TTCAGCAGGACATGATTCGCAACCTGCCGAATTCGGCAGGCTATTCGGACAGCAAGGGCGTCTTCGCCGCGCGCAAGGCG GTGATGCACGAGACCCAGAAGCAGGGCATTGCCGGCGTCACGCTGGACGATATCTACCTGGGCAACGGTGCCAGCGAACT CATCGCGATGTCCACGAACGCGCTGCTCGACGACGGCGACGAGCTGCTCCTGCCGGCCCCCGACTACCCCCTGTGGACTG CCTCCACCAGCCTCTCGGGCGGCACCCCGGTGCATTACCTCTGCGACGAGGCCAATGGCTGGATGCCCAACCTGGCCGAT ATCCGCGCCAAGATCACGCCCCGCACCAAGGGCATCGTGGTCATCAACCCGAACAACCCGACCGGCGCGCTCTATTCCGA CGATCTGCTCAAGAGCATCGTCGCCATCGCCCGCGAACACGGCCTCGTGATCTTTGCCGACGAGGTCTACGACAAGGTGC TGTACGACGGCGTGAAGCACACCGCCATCGCCAGCCTGTCGACCGACGTGCTCACGCTCACCTTCAACTCGCTCTCCAAG AGCTACCGCTCGTGCGGCTACCGCGCCGGCTGGGTCGTGGTCTCGGGCGACAAGCGCGCCGCGCAGGACTACATCGAGGG CCTGAACATGCTCTCGAACATGCGCCTGTGCGCCAACGTGCCGGGTCAGTGGGCCATCCAGACCGCGCTGGGCGGCTATC AGAGCATCAACGACCTGGTCTGCGACGGCGGGCGCTTGCGCCGCCAGCGCGACCTCGCCTACGAACTGATCACCGCCATT CCGGGCGTGACCTGCGTCAAGCCCAGCGCCGCGCTCTACATGTTTCCGAGGCTCGACCCCGAGGTCTACCCGATCACCGA CGACCGCCAGTTCTTCCTCGAGCTGTTGAAGGAAACCCGCGTGATGCTGGTGCAGGGCACCGGCTTCAACTGGGCCACTC CGGACCATTTCCGCATCGTGTTCCTGCCCCATGAAGACGACCTGCGCGAGGCCATCAACCGCATCGCGAAGTTCCTGGAG CAGTACCGACTGCGCCGCAAGACGGCATCCTGA Protein sequence : MKQLKKSAKLANVLYDIRGPIMDAAKQMEDDGQKIIKLNIGNLAVFGFDAPEEIQQDMIRNLPNSAGYSDSKGVFAARKA VMHETQKQGIAGVTLDDIYLGNGASELIAMSTNALLDDGDELLLPAPDYPLWTASTSLSGGTPVHYLCDEANGWMPNLAD IRAKITPRTKGIVVINPNNPTGALYSDDLLKSIVAIAREHGLVIFADEVYDKVLYDGVKHTAIASLSTDVLTLTFNSLSK SYRSCGYRAGWVVVSGDKRAAQDYIEGLNMLSNMRLCANVPGQWAIQTALGGYQSINDLVCDGGRLRRQRDLAYELITAI PGVTCVKPSAALYMFPRLDPEVYPITDDRQFFLELLKETRVMLVQGTGFNWATPDHFRIVFLPHEDDLREAINRIAKFLE QYRLRRKTAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-118 | 57 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-118 | 57 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 2e-118 | 57 |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 2e-118 | 57 |
