Gene Information

Name : Varpa_1864 (Varpa_1864)
Accession : YP_004154185.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Resistance
Product : arsenate reductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1393
EC number : 1.20.4.1
Position : 2057466 - 2057897 bp
Length : 432 bp
Strand : -
Note : TIGRFAM: arsenate reductase; KEGG: bpt:Bpet1022 arsenate reductase; PFAM: arsenate reductase and related

DNA sequence : 
ATGAACGACATCACCATCTATCACAACCCCGCCTGCGGCACGTCGCGCAACGTGCTCGCATTGATCCGCAACACCGGCGA
CGAGCCAAAGGTCGTCGAGTACCTGAAGACCCCGCCCGACCGCGCCACGCTGACAAGGCTGATTGCAGACATGGGCGTGC
CGGTGCGCGAGGTACTGCGCCAGAAAGGAACGCCGTATGGCGAACTCGGCCTCGGCGATGCGAAGTGGAGCGACGAGCAG
TTGATCGATTTCATGCTGCAGCATCCGATCCTCATCAACCGGCCGATCGTGGTGACGCCGCTTGCCACGCGCCTGTGCCG
GCCTTCCGAAGCGGTGCTCGATATCCTGCCGCGACCGCAGCAAGGCGCGTTCACCAAGGAAGACGGCGAAGCCGTCATTG
ACGCAAAGGGCCAACGTGTCGCCAATCCTTGA

Protein sequence : 
MNDITIYHNPACGTSRNVLALIRNTGDEPKVVEYLKTPPDRATLTRLIADMGVPVREVLRQKGTPYGELGLGDAKWSDEQ
LIDFMLQHPILINRPIVVTPLATRLCRPSEAVLDILPRPQQGAFTKEDGEAVIDAKGQRVANP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC2 YP_001007634.1 arsenate reductase Not tested YAPI Protein 4e-47 68
arsC ADZ05768.1 arsenate reductase Not tested AbaR11 Protein 2e-43 65
arsC AFC76436.1 ArsC Not tested AbaR5 Protein 2e-43 65
arsR CAJ77019.1 arsenate reductase Not tested AbaR1 Protein 1e-43 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Varpa_1864 YP_004154185.1 arsenate reductase BAC0585 Protein 1e-48 69
Varpa_1864 YP_004154185.1 arsenate reductase BAC0584 Protein 9e-50 69
Varpa_1864 YP_004154185.1 arsenate reductase BAC0583 Protein 4e-48 68
Varpa_1864 YP_004154185.1 arsenate reductase BAC0582 Protein 1e-48 68