Gene Information

Name : Varpa_1863 (Varpa_1863)
Accession : YP_004154184.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Resistance
Product : arsenical resistance protein arsh
Function : -
COG functional category : R : General function prediction only
COG ID : COG0431
EC number : -
Position : 2056760 - 2057482 bp
Length : 723 bp
Strand : -
Note : KEGG: ctt:CtCNB1_3137 NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase

DNA sequence : 
GTGTCGCCAATCCTTGACGATCTACCCAACCTCGACGCCGGGGCCTTTCTCCAACCCGGGTTGCAGCAGTTGCTGCCGAC
AACGCGCGCAACGCATGCGCCGCGCATCCTGCTGCTCTACGGATCGCTGCGCGAGCGCTCCTACAGCCGCCTCCTGACCG
AGGAAGCCGCGCGCCTGCTGCGCGCGATGGGCGCCGAGCCGCGCATCTACGACCCGCGCGGCCTGCCCCTGCCCGACAGC
GAACCTGAAGACCACCCGAAGGTGCAGGAGCTGCGCGAGCTTGCGCAATGGTCCGAAGGCATGGTGTGGACATCGCCCGA
ACGCCACGGCGCGATGACCGGCATCATGAAAGCGCAGATCGACTGGATTCCGCTGGCCGTCGGCTCCGTGCGGCCCACGC
AGGGAAAGACGCTCGCGGTGATGGAGGTGTCGGGGGGCTCGCAGTCGTTCAACGCGGTGAACCAGTTGCGCGTGCTCGGT
CGCTGGATGCGCATGATCACGATCCCCAACCAGTCGTCGGTGGCGAAGGCCTTCCTCGAATTCGACGACGACGGGCGCAT
GAAGCCCTCGCCGTACTACGAGCGCGTGGTCGACGTGATGGAAGAGCTGGTGAAGTTCACGCTGCTCACGCGCGACTGCG
CGGATTACCTGGTCGACCGCTACAGCGAGCGGCGCGAGAGTGCCGAAGCGTTGTCGAAGCGGGTCAACCTGCGCAGCATC
TGA

Protein sequence : 
MSPILDDLPNLDAGAFLQPGLQQLLPTTRATHAPRILLLYGSLRERSYSRLLTEEAARLLRAMGAEPRIYDPRGLPLPDS
EPEDHPKVQELRELAQWSEGMVWTSPERHGAMTGIMKAQIDWIPLAVGSVRPTQGKTLAVMEVSGGSQSFNAVNQLRVLG
RWMRMITIPNQSSVAKAFLEFDDDGRMKPSPYYERVVDVMEELVKFTLLTRDCADYLVDRYSERRESAEALSKRVNLRSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0236 YP_002232867.1 putative NADPH-dependent FMN reductase Not tested BcenGI11 Protein 1e-80 78
arsH YP_001007636.1 putative arsenic resistance protein Not tested YAPI Protein 3e-75 74
arsH CAJ77015.1 arsenic resistance protein Not tested AbaR1 Protein 1e-71 71
arsH ADZ05766.1 arsenic resistance protein Not tested AbaR11 Protein 1e-71 71
arsH AFC76432.1 ArsH Not tested AbaR5 Protein 1e-71 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Varpa_1863 YP_004154184.1 arsenical resistance protein arsh BAC0595 Protein 2e-63 71
Varpa_1863 YP_004154184.1 arsenical resistance protein arsh BAC0034 Protein 7e-69 66