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Name : Varpa_1796 (Varpa_1796) Accession : YP_004154117.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 1989313 - 1990728 bp Length : 1416 bp Strand : + Note : KEGG: vap:Vapar_1632 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp DNA sequence : ATGGCAAAGACCGTCGCCGATGTACTCAAGCTCGTCAAGGAAAACGAGGTCAAGTTCATCGACTTCCGCTTCACCGACAC CCGTGGCAAAGAGCAGCACGTCACCGTGCCGGTCTCGGCTTTCGATGAAGACAAATTCACGTCGGGGCACGCGTTCGACG GCTCGTCCATCGCTGGCTGGAAGGGGATCGAAGCTTCGGACATGCAGCTCATGCCCGACCCCAACACCGCCAACATCGAC CCCTTCTTCGAAGAAACGACGCTGATCCTGACCTGCGACGTGATCGACCCGGCAGACGGCAAGGCCTACGAGCGCGACCC GCGTTCGCTCGCCAAGCGCGCCGAGGCGTACATGAAGGCATCGGGCCTGGGCGACACCGCCTTCTTCGGTCCGGAACCCG AATTCTTCGTGTTCGACGGTGTTCGCTGGAAGAACGACATGTCGGGCTGCTTCGTGAAGATCGATTCCGAAGAAGCCTCG TGGAACACCGACAAGGAATACGAGCACGGCAACACCGGCCACCGTCCCGCAGTCAAGGGTGGCTACTTCCCGGTTCCCCC AGTCGACAGCTTCCAGGACATGCGCTCGGAAATGTGCCTGGTGCTCGAATCGCTCGGCATCCCGGTCGAAGTGCATCACC ATGAAGTGGCCAACGCCGGCCAGATGGAACTCGGTACCAAGTTCAGCACGCTGGTCCAGCGCGCCGACTGGGTCCAGCTG CAGAAGTACGTGATCCACAACGTGGCCCACGCCTACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTCGGCGACAA CGGCTCCGGCATGCACGTGCACCAGTCGGTCTGGAAGGACGGAAAGAATCTGTTCGCCGGCGACGGCTACGCAGGCCTGT CCGACTTCGCGCTGCACTACATCGGCGGCATCATCAAGCACGCCCGTGCCCTGAACGCCATCACGAACCCCGGCACCAAC AGCTACAAGCGCCTGGTGCCCGGCTTCGAAGCCCCGGTGAAGCTGGCCTATTCGGCCAAGAACCGCTCGGCCTCGATCCG CATCCCGTTCGTGGCCAACCCGAAGGGCCGCCGCGTCGAAGCGCGCTTCCCCGATCCGCTGATGAACCCGTACCTCGGTT TCGCCGCGCTGTTGATGGCCGGTCTCGACGGCGTGGAAAACAAGATCCATCCGGGCGAAGCTGCCAGCAAGGACCTGTAC CACCTGCCGCCGGAAGAAGACGCGCTGATCCCGACCGTGTGCCACAGCCTCGACCAGGCCCTGGAATACCTCGACAAGGA CCGTGCGTTCCTGACCAAGGGTGGCGTGTTCACCGATTCGTACATCGATGCGTACATCGAGCTGAAGATGCAGGAAGTCA CCCGCTTCCGCATGGCGACCCATCCGGTCGAGTTCGACATGTACTACTCGCTGTAA Protein sequence : MAKTVADVLKLVKENEVKFIDFRFTDTRGKEQHVTVPVSAFDEDKFTSGHAFDGSSIAGWKGIEASDMQLMPDPNTANID PFFEETTLILTCDVIDPADGKAYERDPRSLAKRAEAYMKASGLGDTAFFGPEPEFFVFDGVRWKNDMSGCFVKIDSEEAS WNTDKEYEHGNTGHRPAVKGGYFPVPPVDSFQDMRSEMCLVLESLGIPVEVHHHEVANAGQMELGTKFSTLVQRADWVQL QKYVIHNVAHAYGKTATFMPKPIVGDNGSGMHVHQSVWKDGKNLFAGDGYAGLSDFALHYIGGIIKHARALNAITNPGTN SYKRLVPGFEAPVKLAYSAKNRSASIRIPFVANPKGRRVEARFPDPLMNPYLGFAALLMAGLDGVENKIHPGEAASKDLY HLPPEEDALIPTVCHSLDQALEYLDKDRAFLTKGGVFTDSYIDAYIELKMQEVTRFRMATHPVEFDMYYSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 3e-104 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_1796 | YP_004154117.1 | glutamine synthetase, type I | VFG1399 | Protein | 2e-104 | 50 |
