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Name : Varpa_1632 (Varpa_1632) Accession : YP_004153953.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1810525 - 1810908 bp Length : 384 bp Strand : + Note : KEGG: vap:Vapar_1476 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 DNA sequence : ATGAACCTCATCGAAACCCTCGAGCAGGAAGAAATCGCCCGCCTCGGCAAGAAGATCCCCGATTTCATGCCCGGTGACAC GGTCATCGTCAGTGTGAGCGTCGTCGAAGGCACCCGCAAGCGCGTGCAGGCCTACGAAGGCGTCGTGATCGCCAAGCGCA ATCGCGGCCTCAACAGCGGCTTCACCGTGCGCAAGATCTCCAGCGGCGAAGGCGTGGAACGTACTTTCCAGACCTACAGC CCGCTGATCGCCGGCATCGAAGTCAAGCGTCGTGGCGATGTGCGCCGCGCCAAGCTGTACTACCTGCGCGAGCGCAGCGG CCGTTCGGCACGTATCAAGGAAAAGCTGCCGGGCAAGTCGCAAGCAGCAGCGGCCGCCAAGTAA Protein sequence : MNLIETLEQEEIARLGKKIPDFMPGDTVIVSVSVVEGTRKRVQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYS PLIAGIEVKRRGDVRRAKLYYLRERSGRSARIKEKLPGKSQAAAAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 9e-34 | 67 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-25 | 56 |
