Gene Information

Name : Varpa_1596 (Varpa_1596)
Accession : YP_004153917.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : ferrous iron transport protein b
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0370
EC number : -
Position : 1778682 - 1780577 bp
Length : 1896 bp
Strand : +
Note : KEGG: vap:Vapar_1443 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron trans

DNA sequence :
ATGGCTGAAGCCGTCATCCAGGGACCCGGCGGCTTCGCCCCCACCGCCCAGCCGGGGCGCATCGCGCTGCTCGGCAATCC
CAACTGCGGCAAGACCGCGCTCTTCAACCTCTTGACCGGCAGCCGCCAGAAGGTCGCCAACTACGCCGGCGTGACCGTCG
AGCGCAAGGAAGGAACGCTGCGCACGCCCTCGGGCCGCCGCGTCTTCGTGCTCGACCTGCCGGGCGCCTACAGCCTGAAC
GCCCTCAGCGCCGACGAAGCCGTCACCCGCGACATCGTCACAGGCAAGAGCAACGAAGCGCTGCCCGACCTGCTGGTGTG
CGTGACCGACGCCACCAACCTGCGCCTGAACCTGCGCCTCGTGCTCGAGGCGAAAAAGCTCGGCCTGCCGATGGTGGTCG
CGCTCAACATGACCGACATGGCCAAGAAGCAGGGCATCGCGGTAGACACCGCCGTGCTCTCGCGCGAACTCGGCGTGCCG
GTGATCGAAACTGTCGGTGTTCACACCGGCGGCGCGAAGAATTTGCTCGAAGCGCTCGACGCACCGGTCGCCGCCGCCGC
ACCGCAGCCCTGGCAGGCGCCCGGTCTGGACGACGTGCTCGCCACGCAGCGCGAGGTGCGCCGCATCCTCGGCCTCGCGG
TGAAGGAGCCGGTCGGCAGCCTCGCCACCAGCGACCGCATCGACCGGGTGGTGATGCACCCGGTCTGGGGCATGGTGGTG
CTGGCCGTCACGATGTTCCTGATGTTCCAGGCCGTGTTCAGCTGGGCCAACGTGCCGATGGACGCCATCAAGGCCGGCAC
CGAGGCGCTCGGCAACCTGCTTAAAACAGCCATTCCCGAAGGCATGCTGCAGAGCCTGCTGGTCGATGGCGTGATCGCGG
GCGTGGGCGGCGTGATCGTGTTCCTGCCACAGATCCTGATCCTGTTCCTTTTCATCCTCGCGCTCGAAGACTCGGGCTAC
CTGCCGCGCGCGGCCTTCCTGCTCGACCGCGTGATGGGCACCGTGGGTCTGTCGGGCCGCTCGTTCATTCCGCTGCTCTC
CAGCTTCGCCTGCGCCATTCCGGGCGTGATGGCGACCCGCACCATCAGCAACTGGCGCGACCGCATCACGACGATCATGA
TCGCGCCGCTCATGACCTGTTCGGCGCGGCTGCCGGTGTATGCGCTGCTGATCGCGGCGTTCATTCCGGCGCGCACCGTG
GGCGGTGTCTTCAACCTGCAGGGCGTGGTGCTCTTCGCTCTGTATGTGTTCGGCATCGTCTCGGCGATGGCCGTGGCCTG
GGTGATGAAGCGCTTTCGCGACAACACGCAGCATTCGCCGCTGCTGATGGAACTGCCGGCCTACCGCTGGCCGAACCTGC
GCAACTTGGCGCTCGGCCTCTACGAGCGGGCGTGGATCTTCATCCAGCGCGTGGGCACGATCATCCTCACGCTCACGATC
CTGCTGTGGTTCCTGTCGACCTTCCCGTCGCCACCCGAAGGCGCGACCGGACCGGCCATCCAGTACAGCCTGGCCGGCAT
GATCGGCCGCGGGCTCGAATACATCTTTGCGCCCATCGGCTTCAACTGGCAGATCTCGATCGCGCTGGTGCCGGGCATGG
CGGCGCGCGAAGTGGCGGTGGGCGCGCTGGGCACGGTGTACGCGCTCTCGGCCACCGGCGACGACGTGGCGGGCGCGCTC
GAACCGCTGATCGCCGGCAGCTGGTCGCTGGCGACGGCGCTGTCGCTGCTGGTCTGGTACGTGTTCGCGCCGCAATGCAT
CTCGACGCTGGCCGCCGTGAAGCGCGAGACGGCCTCGTGGAAGTACGTGTGGATCATGGCGGGCTATCTGTTCGCGCTCG
CCTACGCGGCGTGCTTCATCACCTACCACGTTGCAGTGGCACTGGGCGCGGGTTAA

Protein sequence :
MAEAVIQGPGGFAPTAQPGRIALLGNPNCGKTALFNLLTGSRQKVANYAGVTVERKEGTLRTPSGRRVFVLDLPGAYSLN
ALSADEAVTRDIVTGKSNEALPDLLVCVTDATNLRLNLRLVLEAKKLGLPMVVALNMTDMAKKQGIAVDTAVLSRELGVP
VIETVGVHTGGAKNLLEALDAPVAAAAPQPWQAPGLDDVLATQREVRRILGLAVKEPVGSLATSDRIDRVVMHPVWGMVV
LAVTMFLMFQAVFSWANVPMDAIKAGTEALGNLLKTAIPEGMLQSLLVDGVIAGVGGVIVFLPQILILFLFILALEDSGY
LPRAAFLLDRVMGTVGLSGRSFIPLLSSFACAIPGVMATRTISNWRDRITTIMIAPLMTCSARLPVYALLIAAFIPARTV
GGVFNLQGVVLFALYVFGIVSAMAVAWVMKRFRDNTQHSPLLMELPAYRWPNLRNLALGLYERAWIFIQRVGTIILTLTI
LLWFLSTFPSPPEGATGPAIQYSLAGMIGRGLEYIFAPIGFNWQISIALVPGMAAREVAVGALGTVYALSATGDDVAGAL
EPLIAGSWSLATALSLLVWYVFAPQCISTLAAVKRETASWKYVWIMAGYLFALAYAACFITYHVAVALGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00309 YP_008207774.1 Fe2+ transport system protein B Not tested AbaR25 Protein 1e-148 60
BJAB0868_00313 YP_008211639.1 Fe2+ transport system protein B Not tested AbaR26 Protein 1e-148 60