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Name : Varpa_1532 (Varpa_1532) Accession : YP_004153854.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : 3-oxoacyL-(acyL-carrier-protein) reductase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 1702865 - 1703635 bp Length : 771 bp Strand : + Note : KEGG: vap:Vapar_1391 3-oxoacyL-(acyL-carrier-protein) reductase; TIGRFAM: 3-oxoacyL-(acyL-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR DNA sequence : ATGGCGCAAGGCCCCGATACTTTTTATATGAGCACTCCCAAATTCGAAGGGCAAGTTGCCCTGGTCACCGGCGCATCGCG CGGCATCGGCGCAGCGATTGCGCTCGAGCTGGCGCAGCGCGGCCTGAAGGTCGTCGGCACCGGCACCACCGAAGACAGCG CGGCCAAGATCACGTCGGCCCTGAGCGCATTCGATGGCCGTGGCCGTGCACTCAATGTGAATGACGCCGCAGCCGTCGAA GCTCTGATCGACGAGATCGTGCAGGCCTACGGTTCGATCCACGTGCTGGTCAACAACGCCGGCATCACGCGCGACACGCT TGCGATGCGAATGAAGGACGACGACTGGGATGCGGTGCTCGACACCAATCTCAAGGCCGTCTTCCGCCTCTCGCGCGCAG TGATTCGCCCGATGATGAAGCAGCGCTACGGCCGCATCATCAGCATCACGAGCGTGGTGGGCGCCTCCGGCAATGCCGGC CAGGCCAACTACGCAGCCGCCAAGGCGGGCGTCGCGGGCATGACCCGCGCCCTGGCCCGCGAATTGGGCAGCCGTAACAT CACCGTCAATTGCGTCGCGCCGGGCTTCATCGAAACCGACATGACGGCAAGCCTCCCCGAGGCGCAGCAACAAGCACTTC TGCAGCAGATCCCGCTGGGACATCTGGGCAAGCCGGCCGACATCGCGCATGCGGTGGCGTACCTCGCATCGCCCCAGGCG TCCTACGTGACCGGGCAGGAGTTGCATGTGAATGGCGGCATGCACATGTAG Protein sequence : MAQGPDTFYMSTPKFEGQVALVTGASRGIGAAIALELAQRGLKVVGTGTTEDSAAKITSALSAFDGRGRALNVNDAAAVE ALIDEIVQAYGSIHVLVNNAGITRDTLAMRMKDDDWDAVLDTNLKAVFRLSRAVIRPMMKQRYGRIISITSVVGASGNAG QANYAAAKAGVAGMTRALARELGSRNITVNCVAPGFIETDMTASLPEAQQQALLQQIPLGHLGKPADIAHAVAYLASPQA SYVTGQELHVNGGMHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96175.1 | putative short-chain type regulator | Not tested | T-PAI | Protein | 6e-24 | 42 |
| unnamed | AAT96227.1 | putative short-chain type regulator | Not tested | T-PAI | Protein | 3e-24 | 42 |
| unnamed | AAT96054.1 | putative short-chain type regulator | Not tested | T-PAI | Protein | 3e-24 | 42 |
| unnamed | AAT96098.1 | putative short-chain type regulator dehydrogenase | Not tested | T-PAI | Protein | 9e-24 | 42 |
| unnamed | AAT96115.1 | putative short-chain type regulator | Not tested | T-PAI | Protein | 9e-25 | 41 |
