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Name : Varpa_1448 (Varpa_1448) Accession : YP_004153775.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase sdr Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 1613081 - 1613830 bp Length : 750 bp Strand : - Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_1336 short-chain dehydrogenase/reductase SDR DNA sequence : ATGAGCGCAATCCAGGAAAAAGTCGTCCTCATCACCGGTGCGAGCAGCGGGATCGGCGAGGCCACCGCGCGGCTGCTGGC GCGGCGTGGTGCCAGCGTGGTGCTCGGGGCGCGGCGCACCGACAAGCTTGAAGCCCTTGCGGCCGAGATCAACGCTACGG GCGGCTCGGCGAGCTTCCAGCATCTCGACGTGACGCATCGGCCCAGCGTGGAAGCCTTTGCCGAGTTCGCCTTCGACACG CACGGCCAGATCGACGTGCTGGTCAACGCGGCGGGCGTGATGCCGATGTCGCCGCTGTGGAACCGCAAGATCGAGGAGTG GGAACTCATGATCGACGTGAACCTGCGCGGCGTGCTGCTCGGCGTGGCCGCCGTGCTGCCGACGATGCAGTTGCAGGGCT GGGGCCACATCGTGAACGTGGCGCCCGTGGCCGTGCAGGGCGTGACGCCGGAGTCGGCCGTGTACCACGGCACGCAGTAC GCGGTGAACGCGATCTCCGAGGGGCTGCGCCAGGAGCATGCGGGCCACCTGCACGTCACGGTCGTGAGCCCCGACGTGAC TGGCTTCAGCGACCCGCTGGCCGAGCGCCTCGCCGCGAGCTACCGCTTCGAGCGCATGCACACGCGGCGGCGCCTTGCCT CGCCGGCCGAGAGCGTCGCGCGATCGGTGGCCGGCGCCATCGAGGGATACGGCATCACGATGCCGGTGCGGCCGGGCACG GTGTCGAGGCCGGCCGAGCACGCGTGGTGA Protein sequence : MSAIQEKVVLITGASSGIGEATARLLARRGASVVLGARRTDKLEALAAEINATGGSASFQHLDVTHRPSVEAFAEFAFDT HGQIDVLVNAAGVMPMSPLWNRKIEEWELMIDVNLRGVLLGVAAVLPTMQLQGWGHIVNVAPVAVQGVTPESAVYHGTQY AVNAISEGLRQEHAGHLHVTVVSPDVTGFSDPLAERLAASYRFERMHTRRRLASPAESVARSVAGAIEGYGITMPVRPGT VSRPAEHAW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 1e-34 | 43 |
