Gene Information

Name : Varpa_1368 (Varpa_1368)
Accession : YP_004153695.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1524014 - 1524532 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: lipoprotein signal peptidase; KEGG: vap:Vapar_1267 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II

DNA sequence :
ATGGCCACGACACGCTCTGCATCGGCATCGCGTTCGCGCGGTGGCAGCCTGGGCATCTGGCCCTGGCTCGGGCTGGCGGT
GATCATCGTGATCATCGACCAGTTCACCAAGACGCTGATCCTGGGCTACTACAAGCTCGGTGATGCGACCTACGTGACGA
GCTTCTTCAACGTCGTACGGGCGCACAACACGGGCGCCGCGTTCTCGTTCCTGGCCGACCACTCGGGCTGGCAGCGCTGG
TTCTTCACGGCGATCGGCGTGGCGGCGGCGATTTTCATCGTCTGGATGCTGAGGTCGCACGCGGGCCAGAAGCTCTTTTC
GTTCGCAATGGCCTGCATCCTGGGCGGCGCTATCGGCAACGTGGTCGACCGGATGATGCACGGCTACGTCGTCGACTTCC
TGAGCTTTCACGCGGGCAACTGGTACTTCCCGGCGTTCAATGCAGCGGACAGTGCGATCACGCTCGGTGCCATCTGCCTG
ATCGTGGACGAGATCCGGCGGGTTCGCCGAGGCAAGTAG

Protein sequence :
MATTRSASASRSRGGSLGIWPWLGLAVIIVIIDQFTKTLILGYYKLGDATYVTSFFNVVRAHNTGAAFSFLADHSGWQRW
FFTAIGVAAAIFIVWMLRSHAGQKLFSFAMACILGGAIGNVVDRMMHGYVVDFLSFHAGNWYFPAFNAADSAITLGAICL
IVDEIRRVRRGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 5e-21 46
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 8e-15 44
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-14 44
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-14 44
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 1e-14 44
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 1e-14 44
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 1e-14 44
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-14 44
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-14 44