Name : Varpa_1291 (Varpa_1291) Accession : YP_004153618.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Resistance Product : lipoprotein releasing system, ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 1445940 - 1446617 bp Length : 678 bp Strand : + Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: vap:Vapar_1211 lipoprotein releasing system, ATP-binding protein; SMART: AAA ATPase DNA sequence : ATGAGTGAAGTTGTTCTGAAGGCGCGTGGTCTCACGAAGCGTTTTCACGAAGGTCGCATCGACCTGACGGTGCTGCACGG CGTGGACCTCGACGTGCATGCCGGCGAAACGCTGGCGATCGTCGGCGCATCCGGTTCGGGCAAGAGCACGCTGCTGCACC TGATGGGCGGGCTCGATTCGCCGACCGCAGGCAAGGTCGAACTGCTCGGCAAGGACATCGCGCATGCCGATGCGGCGGAG CAGGGGCGGCTGCGCAACCAGCACCTTGGGTTCGTCTACCAGTTCCATCATTTGTTGCCCGAATTCAGCGCGCTGGACAA CGTAGCGATGCCGCTGAAGATCCGCCGCGTGGAATCGTCGCAGGCGGCGGAGTCGGCTCGCAAGATTCTCACGAGCGTGG GCCTGGGCGAGCGGGTGCAGCATCGCCCGGCCGAACTCTCGGGCGGCGAGCGCCAGCGTGTGGCGATTGCACGTGCGCTG GTCACGCAACCCGCGTGCGTGCTGGCGGACGAGCCGACTGGCAATCTGGACCGCAGCACGGCCGACACGGTGTTCGATTT GATGCTCGATCTGGCGCACCGCCATGGCACGGCGTTCGTGATGGTCACGCATGACCAGGAACTGGCGAAGCGTTGCGACC GGGTGCTGCAACTGGTGGCGGGCCGCCTCGCGGGCTGA Protein sequence : MSEVVLKARGLTKRFHEGRIDLTVLHGVDLDVHAGETLAIVGASGSGKSTLLHLMGGLDSPTAGKVELLGKDIAHADAAE QGRLRNQHLGFVYQFHHLLPEFSALDNVAMPLKIRRVESSQAAESARKILTSVGLGERVQHRPAELSGGERQRVAIARAL VTQPACVLADEPTGNLDRSTADTVFDLMLDLAHRHGTAFVMVTHDQELAKRCDRVLQLVAGRLAG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-28 | 42 |
CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-29 | 42 |
cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 4e-29 | 42 |
CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-29 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Varpa_1291 | YP_004153618.1 | lipoprotein releasing system, ATP-binding protein | NC_012469.1.7686878. | Protein | 7e-39 | 45 |
Varpa_1291 | YP_004153618.1 | lipoprotein releasing system, ATP-binding protein | NC_008702.1.4606598. | Protein | 5e-35 | 44 |