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Name : Theam_0897 (Theam_0897) Accession : YP_004151505.1 Strain : Thermovibrio ammonificans HB-1 Genome accession: NC_014926 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 856753 - 858354 bp Length : 1602 bp Strand : + Note : KEGG: pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E d DNA sequence : ATGTTAAAGACGTTAAGTGAGAAGCAGTTTATAGAGCTTCTGAAGTCTAAAGGGCTCCTGCCCGACCAGGAGTTTAGCTC CTTCCGGCAGGTTGCCGGCCTTTTAAAGTGGAACCTGCCCGAGGTTGAAGAGCTCTTTAAAGGGGCAGGATTCACCTTTA CCAAGAACCTGCCCCTTTCAATTCCCGCCGAGCTTCTCTCTGCCGTTCCCGCCTCCTTCCTGAAAAAAGAGAGGCTCGTT CCTCTCGAAGACGCCGGCAGCCACGTTGTTGTTGCAACCGATAACCCCTTTAACTACGAGGGACTGAAAAAACTCGAGTG GTTGCTCGGTAAGCCGATAGAGGTGGTTGTTGCTCCCTACGACGAGCTCAACGCCCTCCTCTCTACCCAGAGGGAGGAAG AGGAGGAGGTAGCCCCGGTTTCCTACGGCGAGGATATCCTCACCTCCCAGGAGGAAGCTCCCGCCGTTCAGTTTATAAAC GAGGTTTTAACGGTTGCCCTCAGGGCAAGGGCCAGCGATATCCACTTTGAGCCCTTCAGGAACAAGATGAGGGTGAGAAT CCGCATAGACGGTGTTTTAAAAACCGTCCGCGAGCTTCCGGCCTCCAAGATGCCGGCGGTTATCTCCCGCCTCAAGATAA TGGCGGGCCTTGATATAGCTGAAAAGCGGCTTCCCCAAGACGGCAGAATTCTCGTAAAGTTCGGCGGCAAAGACGTAGAC ATCAGGGTTTCCACCCTCCCCACCCACCTTGGCGAGCGGGTTGTCCTCAGGCTGCTCCTCAAGGAGAACATCCTCTACTC AATCAGGGAGCTCGGCCTCCTTCCCGACGATTACGAGAAGCTGACCTCCCTCATAAAGCTTCCCCACGGCATGCTCCTTG TAACGGGCCCTACGGGCTCTGGAAAAACCACAACCCTTTACGCCTCCCTTTCCGAAATCAACAGGGAGGAGATAAACATA ATCACCGTTGAAGACCCGGTTGAGTACGAGCTCCCCGGCATATCCCAAGTTCAGGTAAAGCCCGATATAGGTCTCACCTT TGCAAGTGCCCTCCGGAGCATACTCCGCCAGGACCCAGACGTCATCATGGTGGGTGAGATTCGCGACGTTGAAACCGCCG AGATAGCCGTTCAATCGGCCCTTACCGGTCACCTTGTGTTCTCTACCCTCCACACCAACGACGCCGCCTCCTCGGTCACC AGGCTTCTGGATATGGGAATAGAGCCCTTCCTTGTTGCCTCTTCGGTTGTTGGCGTTATAGCCCAAAGGCTTGTAAGGAA GATATGTCCCCACTGTAAAACCCCCTACACTCCCGAGCCCGGAGAGCTTCAGGAGCTCGGCATAACCGGTTACAGCGGTC CCCTTTACAGGGGAAGGGGTTGCGACTACTGTATGGGAACCGGATACCTGGGCAGAACCGCCATCTACGAGATTCTCGTT ATCGACAGAGACATAAAACGGCTCATACTGGATAGGCGCGACAGCGACGAGATAAAAGAGCTCGCCCTCTCTAAGGGGAT GAGAACCCTTAAAGGAGACGGAGCGGAGAAGGTGAAGCTCGGTATAACAACCGTTGAAGAAGTACTGAGGGTGGCACGGT AA Protein sequence : MLKTLSEKQFIELLKSKGLLPDQEFSSFRQVAGLLKWNLPEVEELFKGAGFTFTKNLPLSIPAELLSAVPASFLKKERLV PLEDAGSHVVVATDNPFNYEGLKKLEWLLGKPIEVVVAPYDELNALLSTQREEEEEVAPVSYGEDILTSQEEAPAVQFIN EVLTVALRARASDIHFEPFRNKMRVRIRIDGVLKTVRELPASKMPAVISRLKIMAGLDIAEKRLPQDGRILVKFGGKDVD IRVSTLPTHLGERVVLRLLLKENILYSIRELGLLPDDYEKLTSLIKLPHGMLLVTGPTGSGKTTTLYASLSEINREEINI ITVEDPVEYELPGISQVQVKPDIGLTFASALRSILRQDPDVIMVGEIRDVETAEIAVQSALTGHLVFSTLHTNDAASSVT RLLDMGIEPFLVASSVVGVIAQRLVRKICPHCKTPYTPEPGELQELGITGYSGPLYRGRGCDYCMGTGYLGRTAIYEILV IDRDIKRLILDRRDSDEIKELALSKGMRTLKGDGAEKVKLGITTVEEVLRVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-85 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-85 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Theam_0897 | YP_004151505.1 | general secretory pathway protein E | VFG0182 | Protein | 8e-94 | 55 |
| Theam_0897 | YP_004151505.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-85 | 51 |
| Theam_0897 | YP_004151505.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-91 | 48 |
| Theam_0897 | YP_004151505.1 | general secretory pathway protein E | VFG1880 | Protein | 6e-78 | 48 |
| Theam_0897 | YP_004151505.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-67 | 45 |
