Gene Information

Name : Theam_0883 (Theam_0883)
Accession : YP_004151491.1
Strain : Thermovibrio ammonificans HB-1
Genome accession: NC_014926
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 840570 - 841262 bp
Length : 693 bp
Strand : -
Note : KEGG: pmx:PERMA_0680 macrolide export ATP-binding/permease protein MacB; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGGCCCTCATAGAGCTAAGAGATGTAAGGAAGAGCTTCCGCCAGGGAGACCTCGAGTTTGAAGTCCTCAGAGGAATCGA
TCTCACGGTAGAGAAGGGCGAGTTCGTTGCCATAATGGGGCCCTCGGGCTCGGGGAAATCGACCCTCATGTACATAATAG
GGTGCCTCGACAGGCCCACATCGGGAAGTTACCGCTTAAACGGGGTAGACGTCCTCAGCCTCAACGACGACAAGCTCTCA
AAACTGAGGGCAACTCACATAGGTTTTGTCTTTCAGGCATTTTACCTTGTTCCCTACCTAACGGTCCTCGATAACACCCT
CCTACCGGTCGAATACCTGCCCAAGGAAGAGCGGAAAGAGCGGTTCAGGGGAACCTCCCCTGCAGAAAGGGCAAAAGAGC
TCCTTACAAGGCTCGGAATGAGAGAAAGGCTCCACTTCAAGCCCGAAGAGCTCTCAGGGGGACAAAAACAGAGAACCGCA
ATAGCAAGGGCCCTCATAAACTCGCCGGAGATAATACTGGCCGACGAGCCCACCGGCCAGCTCGACTCAAAGTCAGGTAA
GGCGGTCATGGAAGTGTTCAAGGAGCTACACCGAGAGGGGAAAACCGTAATAGTGGTTACCCACGATGAGAAAATCGCCT
CTTACGCAGAGCGGATAGTGAAAATCCAAGACGGGAAAATAGTGGAGAGCTGA

Protein sequence :
MALIELRDVRKSFRQGDLEFEVLRGIDLTVEKGEFVAIMGPSGSGKSTLMYIIGCLDRPTSGSYRLNGVDVLSLNDDKLS
KLRATHIGFVFQAFYLVPYLTVLDNTLLPVEYLPKEERKERFRGTSPAERAKELLTRLGMRERLHFKPEELSGGQKQRTA
IARALINSPEIILADEPTGQLDSKSGKAVMEVFKELHREGKTVIVVTHDEKIASYAERIVKIQDGKIVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-33 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theam_0883 YP_004151491.1 ABC transporter related protein NC_012469.1.7686878. Protein 7e-53 53
Theam_0883 YP_004151491.1 ABC transporter related protein NC_008702.1.4606598. Protein 3e-40 47
Theam_0883 YP_004151491.1 ABC transporter related protein CP001581.1.gene798.p Protein 2e-39 44
Theam_0883 YP_004151491.1 ABC transporter related protein CP001581.1.gene598.p Protein 6e-38 41