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Name : Theam_0511 (Theam_0511) Accession : YP_004151124.1 Strain : Thermovibrio ammonificans HB-1 Genome accession: NC_014926 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 463560 - 465266 bp Length : 1707 bp Strand : - Note : KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein DNA sequence : ATGCCGGTTAGAGCAGATGAAAACAAGCTTAAAAGCTTTATCGCAGACAGGTTGGGACTCCCGCTACAACTGCTCCAGGG GAAAGAATGGGAGAAGGAGCTCATAGAGAAGAAGATTGTTTCGGAGGAGAAGCTCCTCTCCCTCCTTTCCGAGTTCTTCG GCGTTCCCTACGTAGACCTAAGGAAAGTGGAAATCCCGCCGGACGTTGTAAAAATCGTTCCGAGGGTAACCGCAGAGAAA CAGCTCATACTCCCCTTTGAAAAGAGGGGGCCGATTCTCCGGCTTGCAATGGCAGACCCCTCCGACGTCCAAACGAGGGA GCGGATAAGGTTCACCACCGGCTTCAAGATACAGCCTTTCGTTGCCCTCCCCTTCAGGATAAAGGAGAAACTGGAGGAGG TTTACGGAAAGGCCGAGGAGGAGTTCTTCTCGAGGCTCAAAAGCGAGATAATGAAAGAGAGCTCCTCTAAGGAGGAGACC CTTGAAGAGGTTCAGATATCCCAGCAAGTTCTGTCGCTGGACGACCTGAAGAGCCTCGCCTCACAAACCCCGATTGTAAA GCTGGTAAACGCAGTTATACTCGAAGCCCTCAAGAAGGGCGCAAGCGACATCCACATAGAGCCCTTTGAGAAGGAGCTTC GAATCCGCTACCGTATAGACGGCGTCCTCCACGTTGTAGCCAAGTACCAGCCCGACATAAAAGACGCCGTAGTGGCGAGA ATCAAAGTCCTGAGCGGACTCGACATAGCAGAGAAGCGCCTGCCCCAAGACGGCCGAATGAGGGCCCGCTTCCAGGGCAG AGACATAGACTTCAGGGTCTCAACGGTTCCCACCGTTTACGGTGAGAAAGTTGTTCTAAGGATACTGGACAAAGGGGCCC TGAAGCTGAACTTAGAGGAGCTGGGCTTTGAAGAGAGGGAGTACAACCTCCTAAAAAAAGCGATACACTCGCCCTACGGC ATGGTTTTAGTAACCGGCCCCACGGGCTCCGGTAAAACCACAACCCTCTACTCGTCGCTCCTCGAGGTGAACAAACCGGA AGTCAACATAATGACCGTAGAGGACCCGGTTGAGTACAACCTCTACGGCATAAACCAGGTTCAGGTGAACCCGGAAATAG GCCTCACGTTCGCAAGGGCACTGAGGGCCTTTCTCCGGCAAGACCCAGACATCATAATGGTCGGAGAAATCAGGGACACC GAAACCGCCGAAATTGCAGTTGAGGCCGCCCTTACAGGTCACCTGGTTCTCTCGACCCTTCACACAAACGACGCCCCGAG CACCGTAACAAGGCTCGTAGATATGGGAATAGAGCCGTTCCTCGTTTCATCCTCGGTAATTCTCGTAATCGCCCAGAGGC TTGCGAGGAAAATCTGCCCCTACTGCAAGGAGGAGTTTAAGTACCCTAAAGAGGTACTCGAAGAGGTGGGCTTCACGCCC GAGGAGATAGAGAAGATAAAAACCTACAAGGGCAAGGGGTGCGAAAAGTGTGACTACACCGGCTACAAAGGCAGGGTGGC CCTTTACGAGGTAATGGAGCTCGTTCCTGAAATCAGAGACGCAATAGTAAAGGGAGAAAACGCAGACAGAATAAGAGAGA TAGCCAAAAAGTACGGAATGAGGACCCTAAGGGAAATCGGCAAAATTAAAATTGCCAAGGGCGTTACAACACCCGAAGAA GTTCTGAGGGTAACGAGGAGCTACTGA Protein sequence : MPVRADENKLKSFIADRLGLPLQLLQGKEWEKELIEKKIVSEEKLLSLLSEFFGVPYVDLRKVEIPPDVVKIVPRVTAEK QLILPFEKRGPILRLAMADPSDVQTRERIRFTTGFKIQPFVALPFRIKEKLEEVYGKAEEEFFSRLKSEIMKESSSKEET LEEVQISQQVLSLDDLKSLASQTPIVKLVNAVILEALKKGASDIHIEPFEKELRIRYRIDGVLHVVAKYQPDIKDAVVAR IKVLSGLDIAEKRLPQDGRMRARFQGRDIDFRVSTVPTVYGEKVVLRILDKGALKLNLEELGFEEREYNLLKKAIHSPYG MVLVTGPTGSGKTTTLYSSLLEVNKPEVNIMTVEDPVEYNLYGINQVQVNPEIGLTFARALRAFLRQDPDIIMVGEIRDT ETAEIAVEAALTGHLVLSTLHTNDAPSTVTRLVDMGIEPFLVSSSVILVIAQRLARKICPYCKEEFKYPKEVLEEVGFTP EEIEKIKTYKGKGCEKCDYTGYKGRVALYEVMELVPEIRDAIVKGENADRIREIAKKYGMRTLREIGKIKIAKGVTTPEE VLRVTRSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-89 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-89 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Theam_0511 | YP_004151124.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 3e-90 | 50 |
| Theam_0511 | YP_004151124.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 9e-101 | 48 |
| Theam_0511 | YP_004151124.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-100 | 46 |
| Theam_0511 | YP_004151124.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 6e-101 | 44 |
