Gene Information

Name : Theam_0134 (Theam_0134)
Accession : YP_004150749.1
Strain : Thermovibrio ammonificans HB-1
Genome accession: NC_014926
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : 5.1.1.3
Position : 110076 - 110864 bp
Length : 789 bp
Strand : -
Note : TIGRFAM: glutamate racemase; KEGG: tye:THEYE_A1384 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase

DNA sequence :
ATGGACGACCGCCCCATCGGGGTTTTCGACTCGGGGGTAGGGGGGTTAACCGTTTTAAAGGCCCTGAGGGAGCTTCTCCC
CGACGAAAACCTCATCTACTTCGGCGATACGGCAAGGGTTCCCTACGGAACGAAATCGCCGAAAACGATAATCAAGTTCA
GCATCCAGAACACGAAGCTCCTTGAGAGCTACGGCGTAAAAATGGTTGTGGTTGCCTGCAACACCTCTTCGGCCCACGCG
CTGGAGATTCTGCAGGAGGAGTTTCCGTTTCCGGTTGTCGGCGTTGTTGAGCCGGGAGCGAAAGAGGCGGTAAAGAGCAC
CGATAACAGGAGAGTAGGGGTCATAGGAACCGAGGCAACCGTAAAGAGCGAGGCCTACAGGAAGGCGATTGTGTCGCTCG
ACCCGTTCTGCACGGTGTTTCAGAAGGCCTGCCCCCTCTTCGTTCCCCTAATAGAGGAGGGGTGGCTCAAAGACCCGGTA
ACCTTGGAGGTTGCCAGGCGGTACCTGGGGGAGTTTAAGGAGTTTAACGTTGACACCCTGGTCCTGGGCTGCACCCATTA
CCCCCTGATAAAGGAGGTGATAGGCGAGGTGCTGCCTGGGATAAGGCTGGTAGACTCTGCAGAGGCGGTGGCAAGGGAGG
TTAAAAGGCTCCTCCCCTACAGGAGAAAGGGTAGCGGAGGTGCAATTAAGGTTCTCGTAAGCGATAAAACGGAGAGGTTT
GAGCGTATAGCCCGCCTGATTATGGGCGAACCGGTGGAAATCGAGGAGGTGAAAGTTGATAAGGAGTGA

Protein sequence :
MDDRPIGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIKFSIQNTKLLESYGVKMVVVACNTSSAHA
LEILQEEFPFPVVGVVEPGAKEAVKSTDNRRVGVIGTEATVKSEAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWLKDPV
TLEVARRYLGEFKEFNVDTLVLGCTHYPLIKEVIGEVLPGIRLVDSAEAVAREVKRLLPYRRKGSGGAIKVLVSDKTERF
ERIARLIMGEPVEIEEVKVDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1468 YP_001800862.1 glutamate racemase Not tested Not named Protein 5e-32 45
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 4e-24 43
glr AAC44708.1 Glr Not tested cag PAI Protein 7e-24 42
glr AAR03882.1 glutamate racemase Not tested cag PAI Protein 3e-24 41