Gene Information

Name : Theam_0133 (Theam_0133)
Accession : YP_004150748.1
Strain : Thermovibrio ammonificans HB-1
Genome accession: NC_014926
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 109385 - 110089 bp
Length : 705 bp
Strand : -
Note : TIGRFAM: ribonuclease PH; KEGG: tjr:TherJR_2567 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
TTGATAAGGAGTGACGGAAGGGCTCCCGACCAGCTCAGGGAGGTAAAGATAACCCTCGACTACATAAAGCACGCAGAGGG
CTCCTGCCTGATAGAGTTCGGCGATACAAAGGTTATCTGCACCGCCTCGGTTGAGGAGAAGGTTCCCCCGTTCCTGAGGG
GAACCGGGCAGGGCTGGATAACCGCCGAGTACGCTATGCTCCCCAGGGCCACGGCTCAACGTATGGTAAGGGAGGCGGCA
AGGGGGAAGCTCACCGGCAGAACCCAGGAGATTCAGAGGCTCATAGGCCGCTCCCTGCGAAGCGCGGTAGACCTGACCGC
CCTGGGCGAGGTAACGATTTGGATAGACTGCGACGTTATACAGGCAGACGGGGGAACGAGAACAGCCTCTATAACCGGGG
CCTTTGTTGCCCTCTACAGGGCCCTTGAGAAGATGGAGAAGCTCGAGGCCGTAAGGTCGTTTCTGGCGGCCGTCAGCGTA
GGAATAGTAGACGGCACAGTCCTTCTGGACCTCAACTACGAAGAGGACTCCATGGCCGAAGTGGACATGAACGTGGTTAT
GAACGAGAAGGGGGAATTTGCCGAGGTTCAGGGCAGCGCAGAGGGCAGACCGTTTACGAGAGATGAACTCGACCGGATGT
TAAACCTTGCAAGTAAAGGTATAATGGAGCTTATCAGCAAACAGAAAGAGGTGCTGAAGCGGTGA

Protein sequence :
MIRSDGRAPDQLREVKITLDYIKHAEGSCLIEFGDTKVICTASVEEKVPPFLRGTGQGWITAEYAMLPRATAQRMVREAA
RGKLTGRTQEIQRLIGRSLRSAVDLTALGEVTIWIDCDVIQADGGTRTASITGAFVALYRALEKMEKLEAVRSFLAAVSV
GIVDGTVLLDLNYEEDSMAEVDMNVVMNEKGEFAEVQGSAEGRPFTRDELDRMLNLASKGIMELISKQKEVLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-61 59