Gene Information

Name : Theam_1237 (Theam_1237)
Accession : YP_004151842.1
Strain : Thermovibrio ammonificans HB-1
Genome accession: NC_014926
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1218855 - 1219493 bp
Length : 639 bp
Strand : +
Note : KEGG: aae:aq_319 transcriptional regulator (PhoB-like); PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence :
GTGAAAATCGCCCTTGTAGAGGACGACCTCTCTATTTTAAACCTCCTAAAGAGGGTGCTTTTAAGCGAGGGGTTTTCGGT
AAGGGAGTTCTCCACGGCAGAGGCCTTTATGAACGCCGTGTTTGAGTATGGCGAGGAGTTTGACCTTGTGATTCTTGACG
TTATGCTCCCGGGAACCGACGGGGTAACGGCCTGCTCCTTCCTGAGGGAAAGGGGGTTTTCGGCACCCATTCTCATGTTA
ACGGCCCTTTCGGAAGAGGAGGAGAAGGTAAAGGGGCTCGACAGCGGCGCAGACGACTACCTTACAAAGCCTTTCGGGAT
AAAAGAGCTCCTTGCACGCATCAGGGCACTCCTCAGGCGCAGCGAAAGGGGGTTCACCCGCGAAGGGGAGTTCAGGTTTA
CAGACGAAGGGGTGGTTGTAGAGGGAAGAGAGGTGAAGCTCACCCGCAAGGAGAAGGAGATCCTGAAGGTTTTAGTGGAG
AACCGGGGGAAGGCCGTTTCAAAGGAGGAGATAGTTGCAAAGGTGTGGAAGGGAGAGCAGGTAAATAAGCGGGTTGTGGA
CGTTCACGTGAAACACCTCAGAGATAAGCTCGGAGACAGGATAAAAACGGTATGGGGAGTGGGATATAAGGTTGTATAG

Protein sequence :
MKIALVEDDLSILNLLKRVLLSEGFSVREFSTAEAFMNAVFEYGEEFDLVILDVMLPGTDGVTACSFLRERGFSAPILML
TALSEEEEKVKGLDSGADDYLTKPFGIKELLARIRALLRRSERGFTREGEFRFTDEGVVVEGREVKLTRKEKEILKVLVE
NRGKAVSKEEIVAKVWKGEQVNKRVVDVHVKHLRDKLGDRIKTVWGVGYKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family AF310956.2.orf0.gene Protein 2e-24 42
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_002952.2859905.p0 Protein 6e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_002758.1121668.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_009641.5332272.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_013450.8614421.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_007793.3914279.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_007622.3794472.p0 Protein 5e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_002745.1124361.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_009782.5559369.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family NC_002951.3237708.p0 Protein 4e-25 41
Theam_1237 YP_004151842.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 6e-17 41