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Name : Theam_1142 (Theam_1142) Accession : YP_004151747.1 Strain : Thermovibrio ammonificans HB-1 Genome accession: NC_014926 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1121592 - 1122875 bp Length : 1284 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: pmx:PERMA_1558 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGATTGACATAAAGGCTCTAAGGAGAGAACCGGAGAAGTTCAAAGAGCTCCTCTCAAGGAGAGACCCCCTATACGCCTC AATGGTAGACGAACTGCTCGCCGTAGATGCCGAGAGAAGGGCCCTGATAACAGAAGCAGAGAACTTGAAGGCGAGGAGGA ACAAGCTTTCAAAGGAGATAGGAAAGCTCTTTAAAGAGGGCAGAAGAGAAGAGGCCCTCAAACTCAAAGCAGAGGTAGAG GAGATATCGGAAAAACTCGTTAAAGTAGAGAGAGAGCTCGCCGAGGTCGAGAAAAAGTTCAACAGACTCATACTCTCCAT ACCGAACCCTCCTCACCCTTCCGTCCCCGTAGGGGAAGACGAAAACGACAACGTAGTGGTAAGAGTGTGGGGAGAGAAAC CCAAATTTGACTTCACGCCCGTTCCCCACTGGGACATAGCAAAATCCCTCGACATACTCGACTTCGAAAGGGCAACAAAG CTGGCAGGTTCAAGGTTTGTGGTCTATAAAAAGTGGGGAGCGAAACTGGAAAGGGCCCTGATAAACTTCATGCTCGACCT CCACACAACGGAGCACGGCTACCAGGAGATAATTCCTCCCTTCCTCGTCAACACAAAAACGATGACCGGAACTGGCCAGC TTCCCAAGTTCGAAGAGGACCTCTACAAAATAGAGGGCGAAGACCTGTGGCTGATACCGACTGCGGAAGTCCCCCTTACC AACCTACACGCCAACGAAATACTGCCCGAAAAAGCCCTTCCCATCTACTACACCGCCTACACGCCGTGCTTCAGAAAAGA GGCGGGAGCCCACGGAAGAGACGTAAGGGGAATAATGAGACTCCACCAGTTCAACAAAGTCGAACTGGTGAAAATCGTTC ACCCCGAAACGAGCTACGACGAACTCGAAAAACTCGTAAAAGAGGCAGAAAAGGTCCTACAGCTCCTCGGACTCCACTAC AGGGTTGTGGAGCTCTGCACCGGAGACTTGGGGTTCTCCGCTGCGAAAACTTACGACATAGAGGTCTGGATACCCTCTCA GGAGAGGTACAGGGAAATCTCCTCCTGCTCAAACTGCGAAGACTTCCAAGCAAGAAGGGCAAAAATAAGGTTCAGGGACA AAGAGGGAAAAACCCAACTCGTTCATACATTAAACGGTTCCGGCCTTGCCGTTGGGAGAACGGTTATAGCAATTCTGGAA CAGTTCCAACAGAAGGACGGAAGCGTGAAAGTTCCAGAAGTTCTGCAAGACTACCTCAAAACCAAAGTAATCACTCCGGA GTAG Protein sequence : MIDIKALRREPEKFKELLSRRDPLYASMVDELLAVDAERRALITEAENLKARRNKLSKEIGKLFKEGRREEALKLKAEVE EISEKLVKVERELAEVEKKFNRLILSIPNPPHPSVPVGEDENDNVVVRVWGEKPKFDFTPVPHWDIAKSLDILDFERATK LAGSRFVVYKKWGAKLERALINFMLDLHTTEHGYQEIIPPFLVNTKTMTGTGQLPKFEEDLYKIEGEDLWLIPTAEVPLT NLHANEILPEKALPIYYTAYTPCFRKEAGAHGRDVRGIMRLHQFNKVELVKIVHPETSYDELEKLVKEAEKVLQLLGLHY RVVELCTGDLGFSAAKTYDIEVWIPSQERYREISSCSNCEDFQARRAKIRFRDKEGKTQLVHTLNGSGLAVGRTVIAILE QFQQKDGSVKVPEVLQDYLKTKVITPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-98 | 54 |
