Gene Information

Name : Theam_1071 (Theam_1071)
Accession : YP_004151679.1
Strain : Thermovibrio ammonificans HB-1
Genome accession: NC_014926
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1047165 - 1049708 bp
Length : 2544 bp
Strand : +
Note : KEGG: tte:TTE2327 ATPase with chaperone activity, ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGAACATCTGGGACGTTTTAAGTGGAAGAGCAAAGGACGCAATACTCCTTTCCCAAGAAATCGCCAAACAGCTGGGTGA
AAGGTACGTAGATACAGAGCACCTTTTACTTGCAATGGTAGAACTGCCCGGTTCTCCCATACTCGACATATTCACGCTTG
CAGGCTTCGACCCCATAAGGGCCAAAAAGTTCATAAGGGAGCAGGTAGATAGGGTAGGACGTTTAGGACTTCCCTCTACC
CACTACGCAGGGTACGAAGAGATATACATCACCCCTACACTTAAAAAAGTCCTCGACGCCGCCTTCGACATTGCCCGTCA
GATGAAGGCCCGCAGCGTAGACCTCGAACACCTTTTCCTCGGCTTCTACGAAGTTCCCGAGAGCATGGCCTACAGGATTC
TCCTTAAACTCGGCCTGGAGAAGGAAGACGCCCTTAAGGCCGTTAAAAAGTACAGGGAAGGCAGGGCAAAAGTATCCCGC
GACATCAGCGCAAAGGCAAAAGCTGCAGGCAAGCAGCTTCCGGAAGTTCTTCGCAAGTACGGTATAGACCTTACGGGCCT
TGCTGAAGAGGGCAAGCTCGATCCCGTTATCGACCGTGAAACCGAGATAAAGAGGGTAATCCAAATCCTCTCCCGTAGGA
CCAAGAACAACCCGGTTCTCGTTGGTCCTGCAGGTGTAGGTAAAACCGCTATTGTAGAGGGTGTTGCCCAGAAAATCGCA
AACGGCGAAGTGCCCGAAAACCTCAAAGACAAGCGCATAGTAGCCCTCGATATGGCGGCACTCGTTGCCGGAACCAAGTA
CAGGGGCGAGTTCGAAGAGCGCCTTAAGCAGGTTCTCGACGCAGTTAAGGAAGAGGGCAACATAATCCTCTTCATAGACG
AGCTCCACACCGTAGTGGGTGCCGGTGCAGCCGAAGGCTCTATGGACGCAGCAAACATCATGAAACCGGCACTTGCAAGG
GGTGAAATAAGGGTAATCGGTGCAACAACCACCGACGAGTTCCGCAAGTACATAGAGAAAGACCCTGCACTCGAAAGGCG
CTTTGCCCCCGTTTGGGTAGACGAGCCCGATATAGAAACGGCCATTCTCATGCTCAAAGGCCTCAGGCCCAAGCTCGAAG
AGCACCACAAAGTTAAGATTACAGACGAGGCCATAGAGGCCGCTGTAAAACTCTCCAAGAAGTACATACAGGGCAGATAC
CTACCCGACAAGGCAATAGACGTCCTCGACGAAGCGTGTGCAAGGAAGAAACTGGAGGCTACATACAGCTCTCCGGAGCT
TGCAGAGCTGAAGGAGAAGCTCCACAACCTCAGGGCCGAGCTCGACGAAGCCGTTAAGGCTGAAGAATTCGACAAGGCTG
CGAAGCTCAAAAAGGAGATTAAAGAGATTGAGGCCCGCATAAAAGAGCTCGAGGAGAAAGTCGAGAAGGCCAAAGAGAAA
GGAGAGGAGCTTCCCGTAGTTACAGCAGAAGACGTTGCAGAAGTAATCTCCGAAATGACCGGTATTCCCGCTTCCAAACT
TCAAGAGGAAGAGATTAAGAAGCTCCTCAGAATGGAAGAGGAGCTCCACAAACGGGTAATCGGCCAAGAAAGGGCCATAA
AAGCCATCTCTGAAGCCATAAGGCGTGCAAGGGCAGGCCTTCAGCCGCCCAACAGGCCGCTGGGTAGCTTCCTCTTCCTC
GGACCTACAGGTGTAGGTAAAACCGAGCTTGCAAAAGCTCTGGCCGAGTACCTCTTCGGCGACGAGAGCGCGATAATCAG
GCTCGACATGTCCGAGTACATGGAGAAACACGCAGTATCCAAGCTCATCGGTGCACCTCCGGGCTACGTAGGCTACGAAG
AGGGCGGTCAGCTTACCGAGGCTGTAAGGCGTAAGCCCTACTCCGTAATACTCCTCGACGAAATAGAGAAAGCTCACCCG
GACGTATTCAACATCCTGCTCCAGATACTCGACGACGGCCGCCTGACAGACGCAAAAGGACGCACGGTAGACTTCAGCAA
CACCGTGATAATCATGACCAGCAACGTAGGCTCCGAGTACCTTATGAACCTCTCCAAAGAGGAGTTCGAGAAGAACTATG
ACAAGATAAAAGAGCAGATAATGGAGGAACTAAAGCGCCGCTTCAGGCCCGAGTTCCTCAACAGGATAGACGAGATAATC
ATCTTCCATCCGCTTGCCGAAGAGGAGATTAAGAAAATCGTTGACCTCCTCATTGCCAAGCTCAACAAACGCCTCGAAGA
GAGAGGCATTAAGGTTAAACTCACAGAAGCCGCAAAGAGCGAGCTCGCCAAGAGGGGCTACGTTCCCGAGTTCGGAGCAA
GACCCCTCAGGAGAACCATCCAGAGGGAAGTTGAAACGCCGCTTTCGGTTAAGATTCTCGAAGGCAGCGTGAAAGAAGGC
GACACAGTAGTGGTAGACTACGACAAAGAAAAGGGTGAGTTCACCTTCAAAGTAGAGAAGGAAGAACTTCCACCCAAAGA
GGCGAAGCTCAAAACGCCTGAAGAAGAGGAGAAGAAAGAAGAAAAGGGCGATAGCGATAAATAA

Protein sequence :
MNIWDVLSGRAKDAILLSQEIAKQLGERYVDTEHLLLAMVELPGSPILDIFTLAGFDPIRAKKFIREQVDRVGRLGLPST
HYAGYEEIYITPTLKKVLDAAFDIARQMKARSVDLEHLFLGFYEVPESMAYRILLKLGLEKEDALKAVKKYREGRAKVSR
DISAKAKAAGKQLPEVLRKYGIDLTGLAEEGKLDPVIDRETEIKRVIQILSRRTKNNPVLVGPAGVGKTAIVEGVAQKIA
NGEVPENLKDKRIVALDMAALVAGTKYRGEFEERLKQVLDAVKEEGNIILFIDELHTVVGAGAAEGSMDAANIMKPALAR
GEIRVIGATTTDEFRKYIEKDPALERRFAPVWVDEPDIETAILMLKGLRPKLEEHHKVKITDEAIEAAVKLSKKYIQGRY
LPDKAIDVLDEACARKKLEATYSSPELAELKEKLHNLRAELDEAVKAEEFDKAAKLKKEIKEIEARIKELEEKVEKAKEK
GEELPVVTAEDVAEVISEMTGIPASKLQEEEIKKLLRMEEELHKRVIGQERAIKAISEAIRRARAGLQPPNRPLGSFLFL
GPTGVGKTELAKALAEYLFGDESAIIRLDMSEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHP
DVFNILLQILDDGRLTDAKGRTVDFSNTVIIMTSNVGSEYLMNLSKEEFEKNYDKIKEQIMEELKRRFRPEFLNRIDEII
IFHPLAEEEIKKIVDLLIAKLNKRLEERGIKVKLTEAAKSELAKRGYVPEFGARPLRRTIQREVETPLSVKILEGSVKEG
DTVVVDYDKEKGEFTFKVEKEELPPKEAKLKTPEEEEKKEEKGDSDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-179 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theam_1071 YP_004151679.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 53
Theam_1071 YP_004151679.1 ATPase AAA-2 domain protein VFG0080 Protein 7e-149 50