Gene Information

Name : SPSINT_0598 (SPSINT_0598)
Accession : YP_004148763.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Virulence
Product : phage holin
Function : -
COG functional category : S : Function unknown
COG ID : COG5546
EC number : -
Position : 620699 - 620953 bp
Length : 255 bp
Strand : +
Note : -

DNA sequence :
ATGATTAACTGGAAAATCAGAATAAAGCAAAAAACATTTTGGGTGGCGATATTATCAGCCATCTTTTTATTTGCACAAAG
TATCGCTAAAGTTTTTGGATACGACATTCAAGTTTATACAGAACAACTGACAGATACGTTAAACAGTGTTTTAGGGATTC
TAGTCTTAATGGGTGTTATTCAAGACCCGACAACACAAGGAGTTAGCGATAGTCATCAAGCACTTAATTATGAAGAACCG
AGACAAAAATATTGA

Protein sequence :
MINWKIRIKQKTFWVAILSAIFLFAQSIAKVFGYDIQVYTEQLTDTLNSVLGILVLMGVIQDPTTQGVSDSHQALNYEEP
RQKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 5e-30 83
SAKOR_01925 YP_008492113.1 Holin Virulence ¥ÕSa3 Protein 5e-30 83
MW1887 NP_646704.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-30 83
SAV1946 NP_372470.1 holin-like protein Not tested ¥ÕSa3 Protein 5e-30 83
SA1760 NP_375055.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-30 83
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 5e-30 83
SAOV_1911 YP_005737356.1 phage-associated holin Not tested ¥ÕSa3 Protein 1e-25 80
SEQ_2040 YP_002747255.1 phage holin Not tested ¥ÕSeq4 Protein 8e-07 47