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Name : SPSINT_0597 (SPSINT_0597) Accession : YP_004148762.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : bifunctional autolysin Atl/N-acetylmuramoyl-L-alanine amidase/endo-beta-N-acetylglucosaminidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG4193 EC number : 3.2.1.96 Position : 618790 - 620679 bp Length : 1890 bp Strand : + Note : - DNA sequence : ATGGCACTGCCTAAAACGGGTAAACCAACGGCAAAACAGGTGGTTGACTGGGCAATCAATTTAATCGGCAGTGGTGTAGA TGTAGATGGTTATTATGGTCGTCAGTGTTGGGATTTACCAAATTACATTTTTAATAGGTATTGGGGTTTTAAGACACCAG GCAACGCAAGAGATATGGCATGGTATCGCTATCCTGCAGGGTTCAAGATATATAAAAACACTACTAACTTTGTCCCTAAG CCGGGCGATATGGCAATTTGGACAGGTGGTAACTACAACTGGAACACATGGGGTCACACGGGTATTGTTGTCGGCCCATC AACCAAAGACTATTTTTATAGTGTAGATCAGAACTGGAATAACGCTAACTCATACGTCGGTAGTCCTGCAGCAAAGATAA AGCATAGTTATTTTGGTGTAACTCATTTTGTTAGACCTGCATACAAATCGGAACCTAAGCTTACACCTATACCACCAGAA AATAAGCCTATACCGAAAGACCCTGAGCCGACAAAGAAACCCGAATCAAACAAACCAATATATAAAGTAGTGACAAAAAT CTTGTTTACTACTGCGCGTATAGAGCTAGTAAAAGCAAATCGCTTTGTACACTACATCACCAAATCAGATAACCACAATA ATAAACCTAATAAAATTGTTATCAAAAACGCAAACACAGCATTGTCTACAAATGACATTTACAAGTATCGAGAAGATTTA AACGAAGATGAAATTCCTCACTTTTTCGTCGATAGATTAAATGTGTGGGCGTGTAGACCTATTGAGGAAAGCGTACAAGG TTATAACAATGCAATAGTTTTATCCATTACAGAAGCGAGAACTGCAGTGAGTGATAATTTTAAGATGAACGAAATCGAAT GCTTATCGTTAGCTAAGCTATTATTAGAGGCTAACGGTAAAAAGATGAACACAAGCTCTATTGTTATCGATAAAAGCTCT TGGAGAACGTTCAAATTGCACACTGGTAAAGATTCTTTGAAGTCTAGTGGTTTTACTTCTAAAGACTATCAAAAGGCTGT CAACGAGCTGATTAAGCTATTTAACGACAAAGATAAGTTATTGAACAATAAACCAAAAGACGTCGTAGAAAAAATAAGGA TTAGAACAGTTGTTAAAGAAAATACAAAATTTGTGCCTAGTGAGTTAAAACCTAGCAATAACATTAAGGACAAGCAAGAC AGTAAAATTGATAGAATCATTAGCAATTACAGCTTAAAACAAGCTTTAGATATTCAATTTAGACTTAATCCGAAGCCCCA AACTTCAAATGGTGTAACTTGGTATACAGCTAGTTTAAATCAAGCTAGGGAAGCGATGGACACTAACAAAATCTTTAACA ACAACGTACAAGTTTATCAGTTTTTGAAGCTGAATCAATATCAAGGAATTTCAGTTGATAAGTTAAACAAGTTGCTTGTA GGTAAAGGGACTTTACAGAATCAAGGTCAAGCGTTTGCTGATGGTTGTAAAAAGTACGGCGTTAATGAAATCTATCTGAT TGCACACGCATTTTTAGAAAGTGCTAATGGTACATCATTCTTTGCGAGTGGTAGAACCGGTGTATATAACTATTTCGGCA TAGGTGCTTTTGACAACAATCCAAATAACGCAATGGAATTCGCACGCAGTCATGGCTGGACATCACCTGCTAAAGCGATT ATTGGTGGTGCCGAATTTGTTGGGAAAGGGTATTTCGATGTAGGTCAAAATACTTTGTATCGTATGCGTTGGAATCCCAA AAAACCAGGCACACATCAGTATGCGACCGATATTAGTTGGGCTAAAGTTCCGGCGAAAATGATTAGTGCGATGTACAAAG AGATTGGACTAAAAGGTGAATACTTTATTTATGATCAATACAAAAAATAA Protein sequence : MALPKTGKPTAKQVVDWAINLIGSGVDVDGYYGRQCWDLPNYIFNRYWGFKTPGNARDMAWYRYPAGFKIYKNTTNFVPK PGDMAIWTGGNYNWNTWGHTGIVVGPSTKDYFYSVDQNWNNANSYVGSPAAKIKHSYFGVTHFVRPAYKSEPKLTPIPPE NKPIPKDPEPTKKPESNKPIYKVVTKILFTTARIELVKANRFVHYITKSDNHNNKPNKIVIKNANTALSTNDIYKYREDL NEDEIPHFFVDRLNVWACRPIEESVQGYNNAIVLSITEARTAVSDNFKMNEIECLSLAKLLLEANGKKMNTSSIVIDKSS WRTFKLHTGKDSLKSSGFTSKDYQKAVNELIKLFNDKDKLLNNKPKDVVEKIRIRTVVKENTKFVPSELKPSNNIKDKQD SKIDRIISNYSLKQALDIQFRLNPKPQTSNGVTWYTASLNQAREAMDTNKIFNNNVQVYQFLKLNQYQGISVDKLNKLLV GKGTLQNQGQAFADGCKKYGVNEIYLIAHAFLESANGTSFFASGRTGVYNYFGIGAFDNNPNNAMEFARSHGWTSPAKAI IGGAEFVGKGYFDVGQNTLYRMRWNPKKPGTHQYATDISWAKVPAKMISAMYKEIGLKGEYFIYDQYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV0909 | NP_371433.1 | cell wall hydrolase | Not tested | ¥ÕSa1 | Protein | 1e-112 | 45 |
