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Name : SPSINT_0503 (SPSINT_0503) Accession : YP_004148668.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : primase, superantigen-encoding pathogenicity islands SaPI Function : - COG functional category : R : General function prediction only COG ID : COG3378 EC number : - Position : 548920 - 551289 bp Length : 2370 bp Strand : + Note : - DNA sequence : GTGGCACTAAAAGTAAAAGATAATATATTAAGAGTTAATGAAGATAATATTCCAAAAGAATTAAAAGAAATTCCTAATTG GGTGCTTTGGTGTGCTAAATGGAATGAAAAACAACAGAATTATAGCAAGGTTCCTTATAATGATAAAGGTTATAGAGCAA GTTCTAATAATAAGAATACATGGACTGACTTTAATACGGCTTATATAGAATACGAGATGAATGAAAAATACAGTGGTATT GGTTTTGTTTTAAGTGGTGACAATGAATACATTTGCTTAGATATAGATAACGCTGTTAGCGACAACGGTGAAATACATTC AGATTTGGTTAAAACACTAAATAAAATGACGTACTGTGAAAAATCACCGAGTGGAACAGGCGTACACTGTTTCTTTAAAG GCAAGCTACCAAGCAATCGTAAGAAGAAACGTACTGATTTAGATATTGAATTATATGATACGGCTAGATTTATGACGGTT ACGGGCGAATCAATTGGACAAAGCGAAATAAGCGAAGATCAAACCATATTGAATAATTTAGTTGAACAGTATTTTAAAGA AGAAGCCTCTTTTGAAGCAACTACGACAAATAACCATAATAGTGAAAGTCAACTTTCTGATGAGGAAGTTATAAATATTA TGCTTAAATCCAAGCAAAAGGATAAAATTAGTGACTTACTACAAGGAGATTACGAACAATATTTTGCAAGTCCTAGTGAA GCCGTACAAAGCCTATTACATTATTTAGCATTCTATACAGGAAAAAACAAAGCTCAAATGGAACGTATATTCTTAACTTA TAACAATTTAACCGATAAATGGAATAGTAAGCGTGGCAATAGCACATGGGGAGAATTAGAGCTTGAAAAGGCTATTGCAA ATCAAAAAGAAGTATATCAAAAAGGTATAAATGATTTTGAAGTAATATTAAGTGACAAAGAAAGTGTAAGAAAAATGTTA AGTAAAGTTGGGGATGATGAACGTTCATATATGGAAAAACTTTGGATAGAAGAGGGTGAGAAAGGCAGAAAACCAACAGT TATAAGCCCTAATAGATGCGCTCATCTTTTGAAAGAAAACTTGAAATTTATTTTATTTGACCTTGAAGAAAATACAAAAT TAGCCATGTATAGAGCTGAAGAAGGCATTTACACACAAAATGTTTCTTATATTAAACGAGTTATTTCGTGGTTAGAACCT AAACTTAACAGCAACAAAGCTGACGAAGTCATCTATCACTTAAAGAATAGAGTCGATATAAAAAGTAAAACGAATTCGCC CGATTTAATACCTGTTAAAAATGGTGTGTTTAATCGTAAAACAAAACAACTAGAACCTTTTACACCTGAATATGTGTTTA CCACTAAAATTAATACAGCTTATAAAACACAAAGTGGGGTGCCTGTAATAGAGGGTTGGAGTGTCGACAATTGGATTAAT GAAATAGCTTGTAATGATCATGGTGTTGCTAAGTTGCTTTGGCAAGTCATTAATGATTCTTTAAATGGTAATTATACTCG CAAAAAAGCCATATTTTTAGTTGGTGATGGCAACAATGGTAAAGGGACATTTCAAGAATTAATATCACAGCTTATTGGTG CTGAAAATATTGCAAGCCTAAAAGTGAACGAATTTGATGAAAGATTTAAATTAAGTGTGTTAGAAGGAAAAACCGCTGTA ATTGGTGATGATGTGCCAGTAGGTGTTTATATAGATGATTCTTCAAATTTCAAAAGTGTAGTTACTGGTGATCCAGTTCT TGTTGAATTTAAGAATCAGCCTTTATATAGAGCCACATTCAAATGCACGGTGATTCAATCAACAAATGGCATGCCTAGCT TTAAAGATAAGACTTCAGGAACGTTAAGAAGATTGTTGATAGTTCCGTTTAATGCAAATTTCAATGGGCAATCTGAGAAT TTCAATATAAAAGAGCAGTATGTTAAAAATCAAAAAGTATTAGAGTATGTGCTTTACAGATCAATCAATATGGATTTTGA CACTTTTGATATTCCTGAGGCATCAAATAATATGTTAGACATTTACAAACAGGATAACGACCCTGTTTACGATTTTAAAG TTAATGTTTTTGATGAATGGGTTGTTAAAACTATACCCAAAAAAGTTGTTTATTATAAATATAAAGAATTTTGCGAGCAT AGCGGCTATACAGGAGTGTTATCAGATAGAAAATTCTACAAGAGTTTTGAGGGGTATCTCGGAGAAAAATGGGATACAGA TGATAGAGGTAGATTTTCAAATGATGATATTAGTGATTTAGATCAAAAGATAGGATACTTTAATAAAGCTTTAGTTATAC CAAATAAGCAGTGTAGGATTTATAGGAATGAAAACTTAAAAATTGTGTGA Protein sequence : MALKVKDNILRVNEDNIPKELKEIPNWVLWCAKWNEKQQNYSKVPYNDKGYRASSNNKNTWTDFNTAYIEYEMNEKYSGI GFVLSGDNEYICLDIDNAVSDNGEIHSDLVKTLNKMTYCEKSPSGTGVHCFFKGKLPSNRKKKRTDLDIELYDTARFMTV TGESIGQSEISEDQTILNNLVEQYFKEEASFEATTTNNHNSESQLSDEEVINIMLKSKQKDKISDLLQGDYEQYFASPSE AVQSLLHYLAFYTGKNKAQMERIFLTYNNLTDKWNSKRGNSTWGELELEKAIANQKEVYQKGINDFEVILSDKESVRKML SKVGDDERSYMEKLWIEEGEKGRKPTVISPNRCAHLLKENLKFILFDLEENTKLAMYRAEEGIYTQNVSYIKRVISWLEP KLNSNKADEVIYHLKNRVDIKSKTNSPDLIPVKNGVFNRKTKQLEPFTPEYVFTTKINTAYKTQSGVPVIEGWSVDNWIN EIACNDHGVAKLLWQVINDSLNGNYTRKKAIFLVGDGNNGKGTFQELISQLIGAENIASLKVNEFDERFKLSVLEGKTAV IGDDVPVGVYIDDSSNFKSVVTGDPVLVEFKNQPLYRATFKCTVIQSTNGMPSFKDKTSGTLRRLLIVPFNANFNGQSEN FNIKEQYVKNQKVLEYVLYRSINMDFDTFDIPEASNNMLDIYKQDNDPVYDFKVNVFDEWVVKTIPKKVVYYKYKEFCEH SGYTGVLSDRKFYKSFEGYLGEKWDTDDRGRFSNDDISDLDQKIGYFNKALVIPNKQCRIYRNENLKIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0809 | YP_493509.1 | putative DNA primase | Not tested | SaPI5 | Protein | 0.0 | 69 |
| SAOV_2058c | YP_005737501.1 | Putative DNA primase | Not tested | SaPI2 | Protein | 0.0 | 68 |
| MW0751 | NP_645568.1 | putative primase | Not tested | vSa3 | Protein | 0.0 | 68 |
| SAPIG0476 | YP_005733286.1 | putative primase | Not tested | SAPI-S0385 | Protein | 0.0 | 67 |
| SAOV_0421 | YP_005735937.1 | putative DNA primase | Not tested | SaPI1 | Protein | 0.0 | 67 |
