|
Name : SPSINT_2443 (SPSINT_2443) Accession : YP_004150607.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2603158 - 2604438 bp Length : 1281 bp Strand : - Note : - DNA sequence : ATGTTAGACATTAAATTATTTAGAAATGAGCCAGAGAGAGTTAAGGAGAAAATTGCGTTACGTCAAATGGATCCATCAGT TGTAGATGAAGTGTTAGCGTTAGACCAACAACGCCGTGATTACATACAACAAACTGAAGAATTAAAAGCAGAACGTAACA AAGCTTCTCAACAAATTGCTGAAAAGAAACGTAATAAAGAAAATGCGGATGATGCGATTAAAGCGCAACGTGAAGTAGGA GAAAAAATTAAAAATATCGATGCACAGTTAAAAGAAGCGGATACGAAATTAAATGACATCTTATCACGTATTCCAAACCT TATTCACGATGATGTGCCTGAAGGTGAAGATGATTCTGATAACGTAGAACTTAAAAGATGGGGAACACCACGTGAGTTCG ACTTTGAAGCAAAAGCGCACTGGGACTTAGTAGAATCACTAGAAATGGCAGACTTTGATCGTGCCGCACGTGTGTCTGGT GCACGTTTCGTTTATTTAACGAATGACGGTGCTAAATTAGAGCGTGCATTAATGAACTTTATGATTACGATGCATACGAC ACAACATGGTTATCGCGAAATGATGGTACCACAGTTGGTGAATGCTAAAGCGATGTACGGTACAGGTCAATTACCTAAAT TTGAAGAAGATTTGTTTAAAGTAGAAAAAGAAGGCTTATACACAATTCCAACTGCTGAAGTGCCTTTGACAAACTACTAT AGAGACGAAATTGTACAGCCGGGGGTCTTACCAGCTAAGTTTACAGGTCAATCAGCATGTTTCAGAAGTGAAGCGGGATC AGCTGGCCGTGATACACGTGGCTTAATCCGTCTGCACCAATTCAATAAAGTTGAAATGGTGCGTATTGAAAAACCTGAAG ATTCTTGGGATGCTTTAGAAGAAATGACATCAAATGCAGAAGCGATTCTTGAAGCATTGAACTTACCATACCGTCGTGTG ATTTTATGTACAGGCGATATTGGTTTCGGTGCAAGTAAAACATATGACTTAGAAGTATGGTTACCAAGCTACAGTGACTA TAAAGAAATTAGTTCATGTTCAAACTGTGTAGATTTCCAAGCGCGTCGTGCCAATATCCGTTTCAAACGTGATAAAGATG CCAAACCTGAATATGCACATACGTTAAATGGTTCAGGTTTAGCAGTAGGTCGTACATTTGCGGCGATTGTAGAGAACTAT CAAAATGAAGACGGTACGATTACAGTGCCTGAAGCGTTAGTCCCATTCATGGGTGGTCAAACAGTTATCAAACCGCTTTA A Protein sequence : MLDIKLFRNEPERVKEKIALRQMDPSVVDEVLALDQQRRDYIQQTEELKAERNKASQQIAEKKRNKENADDAIKAQREVG EKIKNIDAQLKEADTKLNDILSRIPNLIHDDVPEGEDDSDNVELKRWGTPREFDFEAKAHWDLVESLEMADFDRAARVSG ARFVYLTNDGAKLERALMNFMITMHTTQHGYREMMVPQLVNAKAMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNYY RDEIVQPGVLPAKFTGQSACFRSEAGSAGRDTRGLIRLHQFNKVEMVRIEKPEDSWDALEEMTSNAEAILEALNLPYRRV ILCTGDIGFGASKTYDLEVWLPSYSDYKEISSCSNCVDFQARRANIRFKRDKDAKPEYAHTLNGSGLAVGRTFAAIVENY QNEDGTITVPEALVPFMGGQTVIKPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-118 | 59 |
