Gene Information

Name : SPSINT_2416 (SPSINT_2416)
Accession : YP_004150580.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Resistance
Product : lead, cadmium, zinc and mercury transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.3
Position : 2567010 - 2569058 bp
Length : 2049 bp
Strand : -
Note : -

DNA sequence :
TTGAAAAATAATCAAGAGCACCATCATCACCAACATGTGCATGAAAGTCACCACCCTCATAGTCATCATATGCATCACGA
TGACCATGCACATCACCATCACGAGAATTTTAAAATGAAGTTTTTTGTGTCATTGATTTTTGCGATACCGATTATCATTT
TTTCTCCAATGATGGGCGTACAATTGCCATTTCAATTCACATTTCCAGGTTCTGACTGGATGGTGTTAATCCTTGCGACC
ATTTTATTTATTTACGGCGGGCAACCGTTTTTGGTTGGCGCGAAAGGTGAAATCACTTCGAAAAAACCGGGCATGATGAC
GCTCGTTACTTTAGGTATTTCAGTTGCTTACATTTACAGTCTGTATGCTTTTTATTTGAATCATTTCAGTGATGCAACAG
GTCATACGATGGATTTTTTCTGGGAACTCGCGACATTAATTTTAATTATGTTGTTGGGTCATTGGGTTGAAATGAACGCG
GTTGGAAGTGCTGGCGATGCATTGAAGAAAATGGCAGCACTGTTACCGGATAAGGTGATTAAAGTTACGAATAATCAACG
TGAGGAAGTTAAAATATCGGATATTGCGTTAAATGATATCGTTGAAGTGAAAGCGGGAGAAAGTATTCCGACAGATGGTA
TGATTGTTCGAGGTGAGACTGCGATAGACGAATCGTTAGTGACCGGGGAGTCTAAAAAAGTTCAGAAAAAGCCAAATGAT
CAAGTCATCGGTGGTTCTATCAATGGGTCTGGCACGATACAAGTGAAGGTGACTGCTGTAGGAGAAGCAAGTTACCTTTC
GCAAGTGATGGATATTATAAAACAAGCTCAAAATGACAAGTCTCGAGCGGAGTTACTATCTGATAAAGTGGCGGGTTACC
TTTTCTATTTTGCCGTAAGTGTCGGTGTGATTGCTTTTATTATATGGATGTTGATAGACAATCATATTGATTTCGCATTA
GAACGACTCGTTACGGTGCTAGTCATTGCTTGTCCACATGCGCTAGGGTTGGCCATACCTTTAGTGACTGCACGTTCGAC
ATCAATAGGAGCGCATCATGGTTTGATGATTAAAAATAGAGCAGCGATAGAAACGGCACAACATATTGATTATGTCATGA
TGGATAAGACAGGTACACTCACTGAAGGTCACTTCTCAGTCAATCATTATGAGAGCTTTAAAGCGGGTGTGAGTGATGAG
GAAGTATTAAGTTTGTTTGCTTCATTAGAAAGTCAATCGAATCATCCATTAGCAACGAGTATTGTGGATTTCGCTAAAAA
TAAAAGTATCTCATATGTCCAACCTCAAGACGTTCGAAATATCCCGGGTGTCGGATTAGAAGGGACAATTAACGGTCAAG
CTTATAAAATCACCAATGTTTCCTACCTTGAACAAAATGGGTTTGATTATGATCAAGCGTTGTTCACGAAATTAGCACAG
CAAGGCAATTCCATTAGCTATTTAATCGATGAACAACAAGTCATAGGTATTATCGCGCAAGGTGATCAAATTAAAGACAG
TTCGCAACAAATGGTGGCAGATTTGCTCGCGAAAGGTATCACACCTGTCATGCTCACGGGTGATAATCAAGAAGTGGCGG
AAACGGTAGCGAAAGCGTTAGGCATTAATGATGTCCATGCACAACTCATGCCAGAAGATAAGGAAAGCATTATCAAAGCG
TATCAAAGTAAAGGTAAGAAAGTGATGATGGTGGGTGACGGTATTAATGATGCGCCGAGTTTGATCAGATCAGACATCGG
TATCGCCATTGGAGCAGGTACAGATGTTGCAGTAGACTCTGGTGATGTTATCCTTGTTAAGAGTGAGCCGAGTGACATCA
TTCATTTCTTCACACTTTCAAAACGGACAATGAGAAAAATGGTTCAAAACTTATGGTGGGGTGCAGGGTATAATATTGTG
GCTGTACCTTTAGCTGCAGGTATTTTAGCGTCGATAGGCTTGATTTTATCTCCAGCAGTGGGGGCAATTCTCATGTCGCT
CAGTACTGTTATCGTTGCGATTAATGCCTTTACACTGAAATTGAAATAG

Protein sequence :
MKNNQEHHHHQHVHESHHPHSHHMHHDDHAHHHHENFKMKFFVSLIFAIPIIIFSPMMGVQLPFQFTFPGSDWMVLILAT
ILFIYGGQPFLVGAKGEITSKKPGMMTLVTLGISVAYIYSLYAFYLNHFSDATGHTMDFFWELATLILIMLLGHWVEMNA
VGSAGDALKKMAALLPDKVIKVTNNQREEVKISDIALNDIVEVKAGESIPTDGMIVRGETAIDESLVTGESKKVQKKPND
QVIGGSINGSGTIQVKVTAVGEASYLSQVMDIIKQAQNDKSRAELLSDKVAGYLFYFAVSVGVIAFIIWMLIDNHIDFAL
ERLVTVLVIACPHALGLAIPLVTARSTSIGAHHGLMIKNRAAIETAQHIDYVMMDKTGTLTEGHFSVNHYESFKAGVSDE
EVLSLFASLESQSNHPLATSIVDFAKNKSISYVQPQDVRNIPGVGLEGTINGQAYKITNVSYLEQNGFDYDQALFTKLAQ
QGNSISYLIDEQQVIGIIAQGDQIKDSSQQMVADLLAKGITPVMLTGDNQEVAETVAKALGINDVHAQLMPEDKESIIKA
YQSKGKKVMMVGDGINDAPSLIRSDIGIAIGAGTDVAVDSGDVILVKSEPSDIIHFFTLSKRTMRKMVQNLWWGAGYNIV
AVPLAAGILASIGLILSPAVGAILMSLSTVIVAINAFTLKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 0.0 83

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSINT_2416 YP_004150580.1 lead, cadmium, zinc and mercury transporting ATPase BAC0079 Protein 0.0 57
SPSINT_2416 YP_004150580.1 lead, cadmium, zinc and mercury transporting ATPase BAC0383 Protein 1e-149 50
SPSINT_2416 YP_004150580.1 lead, cadmium, zinc and mercury transporting ATPase BAC0629 Protein 2e-133 46