|
Name : SPSINT_1645 (SPSINT_1645) Accession : YP_004149809.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : transposase for ISSha1 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 1710719 - 1712038 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGTGTAATGATATATCAGAAATACTAGGAATTAAAGTTAAAAATTTAAAAATCACTCAAAATTTAGGATTACATGTTCA TAAAAACGTACAGGCATTATTCTATGAAGGTCAATTGACTTATCATCCCAGTGCTTGTGAGTGTTGTGGAATTAAAAATG ATAACCATTTAATTATTAAACATGGCTTTCGTAAAACGAATGTTTATATGGGGTTAATTTTTGAAAGACCTGCCTATTTA AAATTGAAGAAACAGCGCTTTTACTGTAAAGCTTGCCAACGCACCTTTACAGCTGAAACGCCCTATATTCAACCCCGATG TACCATCTCAAATGAGGTCAAACGCATGATGACCTGGAAACTATCAAAAGTTACATCTGAAAAAGATATCGCTGAAAGTC TATGTGTATCGCCTTCAACTGTCCATCGCCATTTAAAAGTAGTAAGTAATTCGGTGAAGACACACGCACATTACGTTTTA CCTGAGCACTTAGCTTTTGACGAATTCAAGTCGACGAAAGATGTCGAAGGTACAATGAGCTTTATTTACTGTGATAGTGT GACTCATGATATCATTGATATTTTACCTGATCGTCGCAAACATCAATTAGAAGCTTATTTTTTAAAGTTCTCTAGAAAAC AACGTGAAAAAGTAAAAACGGTCTCTATAGATATGTTTCCACCTTATATCGCTCTGATTCAGGATTTATTTCCTGATGCG GAAATCATTATCGATCGCTTTCATATCGTACAAGCCATCAATCGTGAAATCAATCGCTGCCGTGTTCAAGTCATGAATGG TTTTAGGACAAAAGAGCGACCTCAATATAATAAATTAAAGCGTTATTGGAAGTTACTATTAAAAGCGCCCATTGATTTAG ATCGAATGATATATCAGCCATACAGACTTTTTAAGTCATGGCAGAGCCAGTACAGTTTAGTTCAATACCTGTTAAATCTT GATGAGACGCTCAAAGAGACATATGAAACAGGACACCGTCTTTTAAGTGCTTTGAAAGCAAACGATATCCAGCAACTACG GTTCATCTTACAGGATGCAAAGATAAAAGATACTTCGAAAGGGCTCAAGCGTGTCATCCACACATTCATCAAATACATGC CTTATATCTCAAGTACTATGCGTCATCGACATTTAACGAATGGACCCATTGAAGGGATTAATAATAAAATAAAACTGATT AAACGTGTTTCTTATGGTTATAGAAATTTCTGGAATTTTAGGAATCGTATCTTAATGATTTCTAAGGTATTTGTAAGTGA ATATAAAAAACGCATTAAACAACAAAATAACGTTGCTTAA Protein sequence : MCNDISEILGIKVKNLKITQNLGLHVHKNVQALFYEGQLTYHPSACECCGIKNDNHLIIKHGFRKTNVYMGLIFERPAYL KLKKQRFYCKACQRTFTAETPYIQPRCTISNEVKRMMTWKLSKVTSEKDIAESLCVSPSTVHRHLKVVSNSVKTHAHYVL PEHLAFDEFKSTKDVEGTMSFIYCDSVTHDIIDILPDRRKHQLEAYFLKFSRKQREKVKTVSIDMFPPYIALIQDLFPDA EIIIDRFHIVQAINREINRCRVQVMNGFRTKERPQYNKLKRYWKLLLKAPIDLDRMIYQPYRLFKSWQSQYSLVQYLLNL DETLKETYETGHRLLSALKANDIQQLRFILQDAKIKDTSKGLKRVIHTFIKYMPYISSTMRHRHLTNGPIEGINNKIKLI KRVSYGYRNFWNFRNRILMISKVFVSEYKKRIKQQNNVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 9e-92 | 47 |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 4e-92 | 47 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 8e-77 | 45 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 8e-77 | 45 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 1e-76 | 44 |
