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Name : SPSINT_1566 (SPSINT_1566) Accession : YP_004149730.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Virulence Product : Panton-Valentine leukocidin subunit S Function : - COG functional category : - COG ID : - EC number : - Position : 1620031 - 1620963 bp Length : 933 bp Strand : + Note : - DNA sequence : ATGGTAAAAAATAAATTATTAGCCGCAACACTATCTATAAGTTTAGTTCTTCCACTTATTACACCATACAGTGAAGAAGC CAAAGCTGCAAACACTATAGAAGAGATCGGCGAAGGAGCACAAATTATTAAAAGAACTGAGGATGTAAGCAGCAGAAAAT GGGGCGTTACTCAAAACATTCAGTTTGACTTTGTTAAAGACCCTAAATACAACAAAGATGCATTAATTATTAAAATGCAA GGTTTTATCAAATCTAGAACAAGTTTTACTGATGTTAAAGGGAAAGGATATGAATCAACAAAAAGAATGCTTTGGCCTTT TCAATATAATATTGCTCTAAAAACAAATGATCCTAATGTCTCTTTAATTAATTATCTCCCTAAAAATAAAATTGAATCAA TAGATGTGAGCCAAACATTAGGTTACAATGTTGGCGGTAACTTCCAAAGTGCACCATTACTTGGGGGTAAAGGCGCATTT AATTATTCAAAGAAAATTAGCTATACTCAAAAGAATTATATTAGTGAAGTCGCACAACAAAATTCAAAAAATATCAGATG GGAAGTCAAAGCAAATTCATTTAATACAGAAAATGGACAAGTATCAGCATATGACAGACACTTATTTGTAAGAAGTCCTA TCGGGCCAAATGCAAGAGACTTTTTTGTGCCAAATGATGAGTTACCTCCTTTAATTCAAAGTGGTTTTAATCCATCGTTT ATTGCAACTGTATCTCATGAAAAAGATAAAGGCGATACAAGTGAATTCGAAATTGCTTATGGTAGAAATCTAGACATTAC GTATGCAACTTTCTTCCCAAGAACTGGCATATTTGCTGAAAGACGTCATAATGCTTTAATGAATCGAAATCTTGTCACTA AATATGAAGTGAACTGGAAAACACACGAAATTAAAGTAAAGGGGCATAATTAA Protein sequence : MVKNKLLAATLSISLVLPLITPYSEEAKAANTIEEIGEGAQIIKRTEDVSSRKWGVTQNIQFDFVKDPKYNKDALIIKMQ GFIKSRTSFTDVKGKGYESTKRMLWPFQYNIALKTNDPNVSLINYLPKNKIESIDVSQTLGYNVGGNFQSAPLLGGKGAF NYSKKISYTQKNYISEVAQQNSKNIRWEVKANSFNTENGQVSAYDRHLFVRSPIGPNARDFFVPNDELPPLIQSGFNPSF IATVSHEKDKGDTSEFEIAYGRNLDITYATFFPRTGIFAERRHNALMNRNLVTKYEVNWKTHEIKVKGHN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 2e-104 | 69 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 7e-95 | 66 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 7e-95 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPSINT_1566 | YP_004149730.1 | Panton-Valentine leukocidin subunit S | VFG1274 | Protein | 3e-90 | 68 |
| SPSINT_1566 | YP_004149730.1 | Panton-Valentine leukocidin subunit S | VFG1277 | Protein | 3e-95 | 66 |
| SPSINT_1566 | YP_004149730.1 | Panton-Valentine leukocidin subunit S | VFG1273 | Protein | 1e-103 | 66 |
