Gene Information

Name : SPSINT_1270 (SPSINT_1270)
Accession : YP_004149434.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Unknown
Product : phage terminase large subunit
Function : -
COG functional category : R : General function prediction only
COG ID : COG4626
EC number : -
Position : 1334257 - 1335897 bp
Length : 1641 bp
Strand : -
Note : -

DNA sequence :
ATGATTAGAAATATACACGTTGATGAATACATCCAAATGTGGAAATCAGGCAAAATAATTTTAAATAAAGAACGCATTTT
ACTTATTGCATATTTAGAAAAATACGTTTTGAACCGTGAAGATTTATATTTTGATGAGGTTCAAATTGAAAATTTCATCA
AATTCACTGAAAAATGGTATTTTCCATTGCAACCATTCCAAAAATTTATAATCCCATTTATTTTTCTGTTCGAGAAAGAA
GGAGACTTCTTATACTACGAGCAGTTTTTTATTACTCTTGGACGTGGTGGCGGTAAAAACGGCTTGATTACTGCGTTATC
CAATTATTTTATCTCTTATTTGCATGGCGTTCCTAATTATGACATATCAGTTGTGGCAAACTCAGAGGATCAAGCAAAAA
CATCATTTGAAGAGGCCTATAACATGATTGAAAAAAATAAACTCGAGGATGTATTTCACAAAACAAAATCAGTGATTACT
GATACTGAAACAAAATCACGTTTTAGATTTAGAACTTCTAATGCTGGCACAAAAGATGGTGGGCGTGAAGGGTGCGTGAT
TTACGATGAAGTACACAGATTTGAAGATAGTGAAACAGTTGACGTTTTCAGTTCTGGACTAGGGAAAGTAAAATGGCCAA
GAGAATTTTTTATTGGCACTGATGGTTATGTTCGTGATGGGTTTTTGGATAAGTTGAAAGAACGTTCGATGTCGATTTTA
AATGGTGAAACGCCAGATGATAGATTGTTTCCATTCATTTGCAAGTTAGATGATGCGTCAGAAGTTGAAAATTCTGAGAT
TTGGGAAAAAGCAAATCCTATGTTTAGCAAGCCAATGAGTCATTATGCAAAAGGATTGTTCAGGAAAGTTAAAAATCAAT
ATAACGAGATGAGTTTTAGTCCTACGAAGCGGCAAGAATTTATGACAAAGAGAATGAATTTACCTGAAGTAGATTTAGAA
AAAGTAGTCGCGCCTTGGGAAGAAATCTTAGCAACGAATCGACCGCTTCCAGAATTAGAAAGAAAGCAATGTATAGGTGG
TTTGGACTATGCAAGTATTAAAGACTTTGCAGCAGTAGGTTTATTATTTCGAGATGGAGAAAATTACATTTGGAAATCTC
ATTCGTTTGTTAGAAAAGGATTTTTAGACACAGTGAAATTGAAAGCACCAATTCATGAATGGGAGAAACAAGGGTTATTG
ACCATTGTTGATGAGCCTTCAATAGACCCATTGCATATAGTGATGTGGTTTGACATGATGCGTGAAACATATGGTCTTGA
AAAAGTCGTTGCCGATAATTTTAGAATGGACTTGCTGAGACCGTATTTTGAAGACTATGACATCGAAATTGAAGTTATTA
AGAATCCTAAAGCCATCCAATCCTTATTAGCTCCACGAATTGAGACTATGTTCGCTAACCATCGTGTTATTTTTGGAGAT
AATCCATTAATGCGCTGGTATACAAACAATGTAGCTGTGAAAACTAAACCTGACGGCAACAAAGAGTATATCAAAAAGGA
CGAAGTGAGACGGAAAACTGATGGATTCCATGCATTAGTTCATGCACTGTATCGTGCTGATGAACTTTTAGAAGTAGATA
TAAACGAAAGCTTAGATTTTTTAAATGCTATTGATTTTTAG

Protein sequence :
MIRNIHVDEYIQMWKSGKIILNKERILLIAYLEKYVLNREDLYFDEVQIENFIKFTEKWYFPLQPFQKFIIPFIFLFEKE
GDFLYYEQFFITLGRGGGKNGLITALSNYFISYLHGVPNYDISVVANSEDQAKTSFEEAYNMIEKNKLEDVFHKTKSVIT
DTETKSRFRFRTSNAGTKDGGREGCVIYDEVHRFEDSETVDVFSSGLGKVKWPREFFIGTDGYVRDGFLDKLKERSMSIL
NGETPDDRLFPFICKLDDASEVENSEIWEKANPMFSKPMSHYAKGLFRKVKNQYNEMSFSPTKRQEFMTKRMNLPEVDLE
KVVAPWEEILATNRPLPELERKQCIGGLDYASIKDFAAVGLLFRDGENYIWKSHSFVRKGFLDTVKLKAPIHEWEKQGLL
TIVDEPSIDPLHIVMWFDMMRETYGLEKVVADNFRMDLLRPYFEDYDIEIEVIKNPKAIQSLLAPRIETMFANHRVIFGD
NPLMRWYTNNVAVKTKPDGNKEYIKKDEVRRKTDGFHALVHALYRADELLEVDINESLDFLNAIDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1775 YP_253690.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-167 62
SAOV_1101 YP_005736596.1 Phage terminase large subunit Not tested ¥ÕSa2 Protein 2e-156 60
SAKOR_01945 YP_008492133.1 Terminase large subunit Not tested ¥ÕSa3 Protein 5e-157 60
SAV1966 NP_372490.1 phage terminase large subunit Not tested ¥ÕSa3 Protein 5e-157 60
SA1777 NP_375075.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-157 60
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 5e-157 60
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 5e-157 60