Gene Information

Name : SPSINT_1267 (SPSINT_1267)
Accession : YP_004149431.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Unknown
Product : phage major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1331220 - 1332347 bp
Length : 1128 bp
Strand : -
Note : -

DNA sequence :
ATGGTCATTAAATTATCAAATGAATTTATTACGGCACGTCAAGAATTAGTTAACGCTATTAAGAATGGCGAATCGGAAGA
AGTACAAGCAAAGGCATATGAAAATATGTTGAATGAGTTAGTTGAAGAAGCGAAAAGACAAGCAAAATTAGAAGCTGAAA
GAGTGACTGATTTAACTAGTGCAGACAAACAATTAAATGCTGCAGATCGCAAATTCTACAATGAAATTAATAAAGAAGTT
GGATACAAGGAAGAAAAGTTAATTCCGCAAGAAACGATTGACCGCATTTTTGAAAACTTAACAACAGCTCATCCATTATT
AGCTGCTATTGGATTAAAGAATGCAGGTTTACGTTTAAAATTCTTAAAATCAGAAACGAAAGGGCAAGCAGTATGGGGTA
AAATCTACGGCGAAATTAAAGGTCAATTAGATGCTGCGTTCAGCGAAGAAACAGCTATTCAACACAAGTTGACAGCTTTT
GTAGTTTTACCAAAAGACTTAACGGATTTTGGGCCTGCCTGGATTGAACGTTTTGTTCGTACGCAAATTGAAGAGGCTTT
TGCTGTTGCGTTAGAAGCAGCATTTTTAGGTGGTACAGGTAAAGATATGCCAATCGGATTGAACCGCCAAGTACAAAAAG
GTGTGTCAGTTTCTGATGGTGTTTATCCTGTCAAAGATGTAACATCTACACTCACATTTAAAGATGCTAAAACAACAGTA
TTAGAATTAACAAAGGTTTTTAAATATCACTCAACTGATGAAAAAGGAAAAGCCGTTGTCGTTAAAGGTAACGTGAATAT
GGTCGTTAACCCAAGTGACGCGTTTGAAATTCAAGCGCAATATACACACTTGAATGCTCAAGGTGTCTATGTGACAGCAT
TACCGTTTAACTTAAACATCATTGAGTCTGTTGCTCAAGAAGCTGGTAAAGTAGTGACGTTTGTTTCTGGTCGCTATGAT
GCTTATTTAGGCGGTGGTATTAAAGTTATGAAATTTGAACAGACTTTAGCTTTAGAAGATTTAGACTTATATACTGCTAA
ACAATTTGCATATGGTAAAGCGAGAGATAATAAAGTGGCGGCATTGCACAAATTATCTTTAGCTACACAAGCAGGATCAC
CCTCGTAA

Protein sequence :
MVIKLSNEFITARQELVNAIKNGESEEVQAKAYENMLNELVEEAKRQAKLEAERVTDLTSADKQLNAADRKFYNEINKEV
GYKEEKLIPQETIDRIFENLTTAHPLLAAIGLKNAGLRLKFLKSETKGQAVWGKIYGEIKGQLDAAFSEETAIQHKLTAF
VVLPKDLTDFGPAWIERFVRTQIEEAFAVALEAAFLGGTGKDMPIGLNRQVQKGVSVSDGVYPVKDVTSTLTFKDAKTTV
LELTKVFKYHSTDEKGKAVVVKGNVNMVVNPSDAFEIQAQYTHLNAQGVYVTALPFNLNIIESVAQEAGKVVTFVSGRYD
AYLGGGIKVMKFEQTLALEDLDLYTAKQFAYGKARDNKVAALHKLSLATQAGSPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 2e-118 74
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 9e-118 73
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-118 73
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 9e-118 73
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 9e-118 73
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 9e-118 73
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 2e-73 49