Gene Information

Name : SPSINT_1241 (SPSINT_1241)
Accession : YP_004149405.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrB
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 1308392 - 1308895 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
ATGATGAAAAGCCCAGTTTATAACGTGAAAGCAGTGCCTATTGATAAGATACAAGCAAATAGCTACAATCCAAATGCCGT
TGCACCACCTGAAATGAAATTGTTGTATCAATCCATCAAACAAGATGGTTATACAATGCCGATTGTGTGTTACTATTTGC
CCGAAGTAGATAAATATGAAATTGTCGATGGGTTTCATAGGTATACAATTATGTTGAAACATAAAGACATTTTCGAAAGG
GAAAATGGTATGTTGCCCGTTTCTGTAATAGATAAACCGATTTCAGATAGAATGGCGTCTACAATTAGACATAACAGAGC
AAGAGGCTCACACAGTATTGACCTAATGGTTAATATTGTGAATGAATTAGTTGAAGCGGGTATGTCAGATAAATGGATAT
TAAAAAATATAGGTATGGATGCCGACGAACTGTTAAGGTTGAAGCAAGTAAGTGGTCTTGCTGCACTATTTAAAGATAAA
GACTTTAATAAAGCATGGAAATAA

Protein sequence :
MMKSPVYNVKAVPIDKIQANSYNPNAVAPPEMKLLYQSIKQDGYTMPIVCYYLPEVDKYEIVDGFHRYTIMLKHKDIFER
ENGMLPVSVIDKPISDRMASTIRHNRARGSHSIDLMVNIVNELVEAGMSDKWILKNIGMDADELLRLKQVSGLAALFKDK
DFNKAWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 7e-57 70
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 1e-34 56
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-34 56
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-26 48
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-26 48
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-26 47
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 5e-26 47
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 5e-26 47
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 1e-26 47
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-26 47
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-16 43
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-16 43
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-16 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSINT_1241 YP_004149405.1 Co-activator of prophage gene expression IbrB VFG1505 Protein 5e-27 47