Gene Information

Name : SPSINT_1128 (SPSINT_1128)
Accession : YP_004149292.1
Strain : Staphylococcus pseudintermedius HKU10-03
Genome accession: NC_014925
Putative virulence/resistance : Virulence
Product : response regulator ArlR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1200829 - 1201506 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAGTACTTATTATTGAAGACGAGCAAAATTTAGCACGTTTCATTGAACTTGAATTTAAGCATGAAAATTATGA
AGTAGAAGTGAAATATGACGGTGTATCTGGTTTGAACCGCGCATTACAGCATGACTTTGATTTAATACTCTTAGATTTGA
TGTTACCAGAAATGGACGGCTTAGAAGTCTGTAAAAGATTAAGAACACAAAAAGATACACCGATTATTATGATTACTGCG
AAAGGTGAAATATACGATAAAGTCACTGGATTAGATATCGGTGCAGATGATTACATCGTTAAACCATTTGAAATTGAAGA
ACTATTAGCTAGAAGTCGCGCACTCATTCGTCGTTATTCAGACGAAAACGTGTCCGATACAAATGTTGTGGAAATTGATG
GTATTAAAATTGATAAGAGTGCTTTTCATGTCACTTATCAAAGCGAAAAACTGGAATTAACGAAAACGGAATTTGATTTA
TTATTACTCCTCGCTGAAAATAAAAATCGCGTCCTTCACCGTGAACAAATTTTAGATCACGTCTGGGGATATGAATCTGA
AGTCGAAACGAATGTGGTTGATGTGTATATCCGTTATTTACGAAATAAGTTAAAGCGCATTGATAAACAAAAATTAATTG
AAACTGTGCGTGGTGTCGGCTATGTGATTCGTCAATGA

Protein sequence : 
MKKVLIIEDEQNLARFIELEFKHENYEVEVKYDGVSGLNRALQHDFDLILLDLMLPEMDGLEVCKRLRTQKDTPIIMITA
KGEIYDKVTGLDIGADDYIVKPFEIEELLARSRALIRRYSDENVSDTNVVEIDGIKIDKSAFHVTYQSEKLELTKTEFDL
LLLLAENKNRVLHREQILDHVWGYESEVETNVVDVYIRYLRNKLKRIDKQKLIETVRGVGYVIRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-28 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_003923.1003417.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_013450.8614146.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002951.3238224.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_007793.3914065.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002758.1121390.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_010079.5776364.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002952.2859858.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_007622.3794948.p0 Protein 7e-65 67
SPSINT_1128 YP_004149292.1 response regulator ArlR AE015929.1.gene1106. Protein 8e-58 67
SPSINT_1128 YP_004149292.1 response regulator ArlR HE999704.1.gene1528. Protein 2e-44 57
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002952.2859905.p0 Protein 3e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_007793.3914279.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_007622.3794472.p0 Protein 3e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002745.1124361.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_009782.5559369.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002951.3237708.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_003923.1003749.p0 Protein 3e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_002758.1121668.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_009641.5332272.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_013450.8614421.p0 Protein 4e-34 43
SPSINT_1128 YP_004149292.1 response regulator ArlR HE999704.1.gene2815. Protein 2e-30 43
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_014475.1.orf0.gen Protein 3e-27 42
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_005054.2598277.p0 Protein 3e-27 42
SPSINT_1128 YP_004149292.1 response regulator ArlR NC_012469.1.7685629. Protein 2e-30 41
SPSINT_1128 YP_004149292.1 response regulator ArlR AF155139.2.orf0.gene Protein 9e-26 41
SPSINT_1128 YP_004149292.1 response regulator ArlR BAC0125 Protein 8e-31 41
SPSINT_1128 YP_004149292.1 response regulator ArlR FJ349556.1.orf0.gene Protein 1e-22 41
SPSINT_1128 YP_004149292.1 response regulator ArlR AE016830.1.gene1681. Protein 2e-33 41
SPSINT_1128 YP_004149292.1 response regulator ArlR AE000516.2.gene3505. Protein 9e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSINT_1128 YP_004149292.1 response regulator ArlR VFG0596 Protein 5e-29 42
SPSINT_1128 YP_004149292.1 response regulator ArlR VFG1390 Protein 7e-37 41
SPSINT_1128 YP_004149292.1 response regulator ArlR VFG1389 Protein 1e-32 41