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Name : SPSINT_0108 (SPSINT_0108) Accession : YP_004148273.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : Osmosensitive K+ channel histidine kinase KdpD Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 116068 - 118692 bp Length : 2625 bp Strand : + Note : - DNA sequence : ATGGAGCGTCATCTAACGATAAAAAGAGGAGCATTAACGATATATTTGGGTTATTCTCCGGGTGTAGGTAAAACTTATGA AATGTTATCCAATGCGATCGATGCTTATCACGAAGGTGCGGATATTAAAATTGGTTATATCGAGCCACATCAACGTAAAG AAACTCAAGCCCTTGCTGAACAATTGCCAGTTATTCAAACAAAATCTAAAAATCATGGCAGCCATACATTCCACTATTTA GATGTTGATCAAATTATTGAAGACGACCCAGATGTGGTCCTCATCGATGAATTAGCGCATACCAACATTTCAAAAGAGCG ACATGAAAAAAGGTACATGGATATTGAAGAAATACTTTCCCACGGCATTGATGTTCATACAACATTAAATATTCAGCACA TCGAAAGTTTGAGTGAACAAGTGGCGTTACTGACGGGGGTCAAAATTAAAGAGCGTGTGCCTGACCAATTCATTATGTCG AGTGATGCAATAGAGGTCATTGATATTTCACCAAAGCAACTCATCAACCGACTTAAAGCAGGAAAAGTGTATAAAAAGGA ACGACTCGACACAGCATTTTCGCATTTTTTTACATATGAGAACCTTACTGAATTACGAGAATTAACATTGAGAACAGCCG CTGATATGATGAGTCAAAAAGAGCATCTTTATAAGAAAAATACAGATATTACCCCGCATGTCGCAGTTGCTATCAGTGGA AGTATCAGCAATGAAACCGTCATTCGAGAGGCACGTCGCATTGCGAACCGTGAGCATGCTCAATTTACAGCGGTGTATAT TGACGTGTTTGATCATGAAGGCAAACAGTATGCAAATAATAGTCAAGTGCACCAAAATTTAATGCTGGCGCAGTCGTTAG GGGCATCCGTCAAAGTGATATATGATAATCAAATTGCATCGGGTCTCGATGATTGGTGTAAATCCCAAAAAGTGACGAAA CTCGTTATCGGTCAACATATGAATGATAAATGGCATACACGGTTGAAGCGGCCTTTAATTGACCAATTACTTGATTTAAA ACATCATTATAAAATTGAAATTGTGCCGATTAAACATATTCAAATGAAAGCAAAGCCTGAGCGACAACATCAACATATGC AACAAAAGCGTTGGACTGTCGATATTTTTAAAATGATTGCGATTCAAGCGATTTGCGTACTGTTAGGCTTGTGGATTTAT AGCACAGGCAAAGGAGAACAAGATACAATCATTCTACTGTTATTTTTATTAGGTATTGTCGTTTTAAGTATGTGGACGCA ATCGTATTTAATCGGTTTTTTCGCTGCGATTTTAAACGTGTTGGTGTTTAATTTCTTTTTTACTGTGCCAAGATTTACGT TTGAGGTTTATCGCTTTGACTATCCTATCACTTTCACGATCAGTATTATCGTGAGTATCGTCACGAGTGGCTTATTAAAA CAAATTAAGCATCAGTACATCGTCACGAAACATCAATTGTACCGGACCGATATTTTGTTGCAGTTTAATGATTCAATTAA ACAAACGTACACGATTCCTGATTTATTAGTGAATGCAAGACATCAAATTCAACATCTGTTAAAGCAAGAAGTTACGATTT ATTTAGTGGAAGATGAAAAAATTTCAAAAACGATACCGGTTGAAGGGCCACAGACTAATGATTCTCGCCACCAACAAGCG CTAAGTTGGATCATTAAAAACCAAAAGCGTGCAGGAGCAACAACGGATACATTTCCAGGTATTCACTATTTGCTCATACC GATTGGCACAAAACCTGTTAAAGCAATCGTTTCCATACACTTTTCTGAAGCGCAAATTATTGATTCCTATGACAATTCTA TTTTAGAGTCCATGTTGAATGAAATGTCGCTTGCTGTAGAGAACTTGAGCTTACTTCGTCAAACACGAGAGTCGATGTTA CGAGCTGAGCGGGAGGTGGCACGTGCCCACTTTTTACGCTCCATTTCTCATGATATTCGCACACCACTAACTTCTATCAT CGGTAATTTGGACGTCTTATTACTCAATGGGAAAGAAATGCCTCGCGCAGAACAACAGCAGTTAGTTTCCCGGTCGTTTG ACGAAGCCCAGTATTTACACATGCTCGTTTCCAATATTTTGTCACTTACCAGACTCGAGCATTCGAATATGAAGCTCAAC CGCCAACTGTATCTCATTGAAGAATTAGTTGAAGAAATCGAATCCGTGCTTGAACGTAGACGGCTCAACAAGCAAGTGAA AGTGTCGGCATTACATGAGATATGCTTCGTCGATATTGATAGTCAGCTCATTTTACAAGCGGTTTTTAATTTGATTGAAA ACGCGTTAAAACATACGCCACCTGAAACACCTATTACGTTAAGAATCAATAAAAATGAACCCCACATATTATTTGAGGTA ATCGATAGGGGACCGGGATTGTCGGATGAAGAACAACAAACGATTTTCCAACCTTTTGAGAAACATCAACTTTTCAAAGA TAACAAGAAAGATAGTATGGGACTCGGACTTTATCTCGTGCAGGCGATTCTACAAAAGCATGACAGTCAATTAAAATATC GACAAAATGAGCCGCATGGGAGTATATTTTATTTCAACTTACCTTTTGAAAAAAATACAAATTGA Protein sequence : MERHLTIKRGALTIYLGYSPGVGKTYEMLSNAIDAYHEGADIKIGYIEPHQRKETQALAEQLPVIQTKSKNHGSHTFHYL DVDQIIEDDPDVVLIDELAHTNISKERHEKRYMDIEEILSHGIDVHTTLNIQHIESLSEQVALLTGVKIKERVPDQFIMS SDAIEVIDISPKQLINRLKAGKVYKKERLDTAFSHFFTYENLTELRELTLRTAADMMSQKEHLYKKNTDITPHVAVAISG SISNETVIREARRIANREHAQFTAVYIDVFDHEGKQYANNSQVHQNLMLAQSLGASVKVIYDNQIASGLDDWCKSQKVTK LVIGQHMNDKWHTRLKRPLIDQLLDLKHHYKIEIVPIKHIQMKAKPERQHQHMQQKRWTVDIFKMIAIQAICVLLGLWIY STGKGEQDTIILLLFLLGIVVLSMWTQSYLIGFFAAILNVLVFNFFFTVPRFTFEVYRFDYPITFTISIIVSIVTSGLLK QIKHQYIVTKHQLYRTDILLQFNDSIKQTYTIPDLLVNARHQIQHLLKQEVTIYLVEDEKISKTIPVEGPQTNDSRHQQA LSWIIKNQKRAGATTDTFPGIHYLLIPIGTKPVKAIVSIHFSEAQIIDSYDNSILESMLNEMSLAVENLSLLRQTRESML RAEREVARAHFLRSISHDIRTPLTSIIGNLDVLLLNGKEMPRAEQQQLVSRSFDEAQYLHMLVSNILSLTRLEHSNMKLN RQLYLIEELVEEIESVLERRRLNKQVKVSALHEICFVDIDSQLILQAVFNLIENALKHTPPETPITLRINKNEPHILFEV IDRGPGLSDEEQQTIFQPFEKHQLFKDNKKDSMGLGLYLVQAILQKHDSQLKYRQNEPHGSIFYFNLPFEKNTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_370595.1 | sensor protein KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| kdpD | NP_373307.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| SH0032 | YP_251947.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 61 |
| kdpD | YP_190032.1 | sensor histidine kinase KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| SAR0069 | YP_039537.1 | sensor kinase | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
