|
Name : SPSINT_0106 (SPSINT_0106) Accession : YP_004148271.1 Strain : Staphylococcus pseudintermedius HKU10-03 Genome accession: NC_014925 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 112078 - 114102 bp Length : 2025 bp Strand : - Note : TC 3.A.3.7.1 DNA sequence : ATGAAACAATCATCTCATGTGTTGAATAGCGCGATTGTCAGACAAGCCATCAAAGAAAGTTTTATTAAATTAAACCCTGT ATCTCTCATTAAAAATCCAATTATGTTTGTCGTAGAGGTGGGGATGGTTTTAACGTTAATTATGACAATCGTGCCACAAA TTTTTACAGATGGCGCGATGTCACGACTTTATTTATTTACGATTTTCATCATTTTATTCTTTACCGTGCTCTTTTCTAAC TTTTCAGAAGCGATTGCAGAAGGTCGCGGTAAAGCACAGGCCAACAGTCTTCGAGAAACAAAGTCTCATATGATTGCACG TCGCATAGTCAACGCTGAAGTATACGAAACGGTTGATGCGTCAGCTTTAAAACGAGGTGACCGTATTCTCGTAAAATCAG GTGAAATGATTCCGTCAGACGGCACCATTATTAAAGGGATTGCCACAGTTGATGAATCTGCTATTACCGGAGAGTCTGCC CCTGTTATAAAAGAATCAGGTGGCGATTTTTCGGGTGTCATTGGTGGAACAACTGTGACGTCGGACTGGCTCATTATTGA AGTAGACAGTGAAGAAGGTGCGACATTTTTAGATAAAATGATTGCCCTAGTTGAAGGGGCCCAACGTAAAAAAACACCAA ACGAAATTGCGCTGTTTACATTGCTAATGACATTAACGATTATTTTTCTCGTTGTCATTTTAACGTTGTATCCCATTGCC CAATATTTAAATCTGAATGTCCCTATCACATCATTGATTGCATTGACAGTTTGTTTAATTCCAACAACGATCGGGGGATT ACTTTCTGCCATTGGGATTGCCGGTATGGACCGTGTTACACAATTTAATATTTTGGCGAAAAGTGGACGCGCGATTGAAA CGTGTGGCGATGTCGATGTCTTAATTTTAGATAAAACAGGCACAATCACGTACGGTAATCGTTTAGCGGAATCCTTACTG CCTGTTCGGGAGGAATGGTATGACAGATTACTCGTCGCAGCGTATGAAAGTTCCGTTGAAGATGATACACCTGAAGGCAA AAGTATCGTCACTTTAGCCAAACGTTCATCCGTACAGTTGCCAGAGGAGGTCAAAGGAGATTATCGACCATTCAAAGCAG AAACACGTATGAGTGGTATCATTATCGGCGAACGTTCAGTCTTTAAAGGGGCACCTAATAGTATGTTGAAATATGTGAAA CAACAAGGTGGGGTGATTCCTTCCAATATCGAAGCACTCGTTACTGAAGTCTCTAGTAAAGGCGGCACACCGTTAATTGT CGTTGAAAACCAAACGATCTTAGGCGTGATCTATTTAAAAGATGTCATTAAAAAAGGCTTGGTGGAACGTTTCCAAGAGT TGCGTCAAATGGGCATCGAAACGGTGATGTGTACCGGTGACAACGAATTGACTGCCGCTACAATTGCAAAAGAAGCCAGT GTCGACCGTTTTATCGCCGAATGTAAACCGGAAGATAAAATCAAAGTCATTAAAGAAGAACAAGAAAAAGGCCACATTGT TGCGATGACAGGTGATGGAACGAATGACGCCCCTGCTCTTGCCCAAGCGAATGTCGGCCTAGCGATGAATTCAGGGACAT TAAGCGCAAAAGAAGCCGCAAACTTAATTGATTTAGATTCCAATCCAACGAAATTAATGGAAGTCGTCAAAATCGGTAAA CAGTTGCTCATGACGAGGGGCGCATTGACAACATTTAGTATTGCGAATGATATTGCCAAATATTTTGCCATTTTACCTGC TATGATGATGGTCACGATACCTGAAATGAGTCGCTTAAATATTATGCAGTTACATTCCCCTGAATCTGCCATTATTTCAG CACTCATCTTTAATGCACTCATTATTGCATTGCTGATTCCTATTGCGATGAAAGGGGTGCGCATTAAAGGGGCGTCGACT GAAACGGTATTGATGAAAAATATGTTGGTCTATGGACTCGGCGGGATGATTGTCCCTTTTATTGGCATTAAATTAATCGA TCTTTTAATTCAATGGTGGCTATAG Protein sequence : MKQSSHVLNSAIVRQAIKESFIKLNPVSLIKNPIMFVVEVGMVLTLIMTIVPQIFTDGAMSRLYLFTIFIILFFTVLFSN FSEAIAEGRGKAQANSLRETKSHMIARRIVNAEVYETVDASALKRGDRILVKSGEMIPSDGTIIKGIATVDESAITGESA PVIKESGGDFSGVIGGTTVTSDWLIIEVDSEEGATFLDKMIALVEGAQRKKTPNEIALFTLLMTLTIIFLVVILTLYPIA QYLNLNVPITSLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRAIETCGDVDVLILDKTGTITYGNRLAESLL PVREEWYDRLLVAAYESSVEDDTPEGKSIVTLAKRSSVQLPEEVKGDYRPFKAETRMSGIIIGERSVFKGAPNSMLKYVK QQGGVIPSNIEALVTEVSSKGGTPLIVVENQTILGVIYLKDVIKKGLVERFQELRQMGIETVMCTGDNELTAATIAKEAS VDRFIAECKPEDKIKVIKEEQEKGHIVAMTGDGTNDAPALAQANVGLAMNSGTLSAKEAANLIDLDSNPTKLMEVVKIGK QLLMTRGALTTFSIANDIAKYFAILPAMMMVTIPEMSRLNIMQLHSPESAIISALIFNALIIALLIPIAMKGVRIKGAST ETVLMKNMLVYGLGGMIVPFIGIKLIDLLIQWWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 0.0 | 75 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-126 | 55 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-126 | 55 |
