Gene Information

Name : Psesu_0089 (Psesu_0089)
Accession : YP_004145182.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 105524 - 106933 bp
Length : 1410 bp
Strand : +
Note : KEGG: xca:xccb100_0205 glutamate-ammonia ligase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp

DNA sequence :
ATGTCCGTGGAAAACGTTGAGAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGATTCGTCGACATGCGTGG
CATGCAGCAGCACGTCACGTTCCCGGCCAGCATCGTCGAGGACTCGCTGTTCGAGGACGGCAAGATGTTCGACGGCTCTT
CGATCGCCGGCTGGAAGGGCATCAACGAGTCCGACATGCTGCTGATGCCCGACCCGGAAACCGCGGTGCTGGATCCGTTC
ACCGCCGACCCGACCCTGATCCTGACCTGCGACGTGCTCGACCCGGCGACCATGCAGGCCTACGCGCGCTGCCCGCGCGG
CGTGGCCAAGCGCGCCGAGGCCTACCTCAAGTCTTCCGGCATCGCCGACCTGGCGTTCTTCGGCCCCGAGCCGGAGTTCT
TCATCTTCGACGCGGTGCGCTACGCCAACGACATGGGCCACACCTTCTTCGAGATCGAGTCCGAGGAAGCGGCCTGGAAC
AGCGGCACCAAGTACGAGACCGGCAACACCGGCTACCGCCCGGGCGTGAAGGGCGGCTACTTCCCGGTAGCCCCGCACGA
CTCCCTGCACGACCTGCGCGCCGAGATGTGCAAGACCCTGGAAGAGGCCGGCATCGAGGTCGAGGTCCACCACCACGAGG
TGGCCACCGCCGGCCAGTGCGAGATCGGCACCAAGTTCAACACGCTCGTGCGCAAGGCCGACGAGCTGCTGACCATGAAG
TACATCATCAAGAACGTCGCCCACCGCAACGGCAAGACCGTCACCTTCATGCCCAAGCCGGTCGTCGGCGACAACGGCAG
CGGCATGCACGTGCACCAGTCGCTGGGCAAGGACGGCAAGAACCTGTTCTCCGGCGACGGCTACGGCGGCCTGTCGCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCACGCCCGCGCGATCAACGCCTTCGCCAACGCCGGCACCAACAGCTAC
AAGCGCCTGGTCCCGGGCTTCGAGGCGCCGGTGATGCTGGCCTACTCGGCCCGCAACCGCTCGGCCTCCTGCCGCATCCC
GTGGGTGTCCAACCCGAAGGCCCGCCGCATCGAGATCCGCTTCCCCGATCCGCTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCCGTAACCAGATCGACCCGGGCGCGCCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAGGAAGAGAAGAACATCCCGAAGGTCTGCTCCAGCCTGGACCAGGCCCTCGAAGCGCTCGACGCGGACCGCGA
GTTCCTCAAGGCCGGCGGCGTCATGAGCGACGACTTCATCGACGGCTACATCGCGCTGAAGATGCAGGAAGTCACCAAGT
TCCGCGCGGCCACGCACCCGCTGGAATACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGMQQHVTFPASIVEDSLFEDGKMFDGSSIAGWKGINESDMLLMPDPETAVLDPF
TADPTLILTCDVLDPATMQAYARCPRGVAKRAEAYLKSSGIADLAFFGPEPEFFIFDAVRYANDMGHTFFEIESEEAAWN
SGTKYETGNTGYRPGVKGGYFPVAPHDSLHDLRAEMCKTLEEAGIEVEVHHHEVATAGQCEIGTKFNTLVRKADELLTMK
YIIKNVAHRNGKTVTFMPKPVVGDNGSGMHVHQSLGKDGKNLFSGDGYGGLSQLALWYIGGIFKHARAINAFANAGTNSY
KRLVPGFEAPVMLAYSARNRSASCRIPWVSNPKARRIEIRFPDPLQSGYLTFTALMMAGLDGIRNQIDPGAPSDKDLYDL
PPEEEKNIPKVCSSLDQALEALDADREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-107 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_0089 YP_004145182.1 glutamine synthetase VFG1399 Protein 2e-111 52