Gene Information

Name : Psesu_0759 (Psesu_0759)
Accession : YP_004145843.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 852267 - 853499 bp
Length : 1233 bp
Strand : +
Note : KEGG: xcb:XC_1252 catalytic residue; other site; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGAGCACCCAGTCCTCCCCGATCGCTTCCAGCGAAGTGACCCCCGCCTGCCGCCCGGCCACCGCCGCGGTCCGCGCCGG
CATCGACCGCGACACCGCCTACGGCGCGGTCACCCCCCCGATCGTGCTGTCGAGCAATTTCAGCTTCGACGGCTTCGGAA
ACAAGCGCCAGTACGACTACACCCGCAGCGGGAACCCGACCCGCGACCTGCTGGCCGAGGCGCTGAGCGACCTGGAAGGC
GGTGCCGGCGGCGTGGTCACCGCCACCGGCATGGGCGCGATCACCCTGGTGCTGCACGCGCTGCTGCAGCCGGGCGACCG
CCTGGTGGTGCCGCACGACGCCTACGGCGGCAGCTGGCGCTTGTTCAACGCGCTGGCCGCCAAGGGCCACTTCGAACTGG
TCACCGCCGACCTCACCGATCCGTGCTCGCTGGCCGATGCGCTGGCCACCTCGCCGAAGCTGGTACTGGTCGAGACCCCG
TCCAACCCGCTGCTGCGCATCACCGACCTGCGCCTGGTGATCGACGCCGCGCACCGCGCGGGCGCGCGGGTGGTAGTCGA
CAACACCTTCCTCTCGCCCGCGTTGCAGCAGCCGCTGGCGCTGGGCGCGGACCTGGTGCTGCATTCGACCACCAAGTACG
TCAACGGGCACAGCGACGTGGTCGGCGGCGCGGTGGTGGCGGCCGATGCCGAAACCCACCAGCAGCTGGTGTGGTGGGCC
AACGCGCTGGGCCTGACCGGTTCGCCGTTCGACAGTTTCCTGACCCTGCGCGGCCTGCGCACGCTCGATGCGCGGATGCG
CGTGCACCAGGAGAACGCCAACGCCATCGCCGCGCTGCTGGACGGCCATCCGGCGGTGGAGAAGGTCTACTTCCCGGGCC
TGGCCTCGCATCCGGGCCATGCCGTCGCGGCACGCCAGCAGTCCGGTTTCGGCGCGATGCTCAGCTTCGAGCTGCGCGGC
GGCGAGCCGGCGGTGCGTGCCTTCGTCGACAGCCTGCGCTGGTTCACCCTGGCCGAGTCGCTCGGCGGCGTGGAAAGCCT
GGTCGCGCATCCGGCGTCCATGACCCATGCGGCGATGACGCCGGAGGCGCGCGCCAAGGCCGGCATCTCCGACGGACTGC
TGCGCCTGTCGATCGGCATCGAGGCCAGCGACGACCTGGTCGCCGACGTGGCGGCCGCGCTGGCCGCGGCCGAGGCGGCG
GCGCCGCTGCCGGCCGAACGGGCACGGGCGTGA

Protein sequence : 
MSTQSSPIASSEVTPACRPATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLAEALSDLEG
GAGGVVTATGMGAITLVLHALLQPGDRLVVPHDAYGGSWRLFNALAAKGHFELVTADLTDPCSLADALATSPKLVLVETP
SNPLLRITDLRLVIDAAHRAGARVVVDNTFLSPALQQPLALGADLVLHSTTKYVNGHSDVVGGAVVAADAETHQQLVWWA
NALGLTGSPFDSFLTLRGLRTLDARMRVHQENANAIAALLDGHPAVEKVYFPGLASHPGHAVAARQQSGFGAMLSFELRG
GEPAVRAFVDSLRWFTLAESLGGVESLVAHPASMTHAAMTPEARAKAGISDGLLRLSIGIEASDDLVADVAAALAAAEAA
APLPAERARA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-54 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_0759 YP_004145843.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 4e-47 42