Gene Information

Name : Psesu_0620 (Psesu_0620)
Accession : YP_004145708.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 694095 - 695192 bp
Length : 1098 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: xal:XALc_2840 probable riboflavin biosynthesis RibD oxidoreductase protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGACCACGACCTTCGACGCCTTCGACCACGCATGCATGGCGCGCGCGCTGCAGCTGGCCGCGCGCGGGCTCTACACCGC
GCGGCCCAATCCGGTGGTCGGCTGCGTGGTCGCGAAGGACGGCGCGGTCGTCGGCGAAGGCTGGCATCCGCGCGCCGGCG
AGCCGCACGCCGAGGTCTTCGCCCTGCGCGAAGCCGGCGAACGCGCGCGCGGCGCCACCGCCTACGTGACCCTGGAGCCC
TGCGCCCACCATGGCCGCACGCCACCGTGCGCCGAGGCGCTGGTGCAGGCCGGCGTGGCGCGGGTGGTGGCGGCCATGCG
CGATCCGTTCCCGCGGGTCGACGGCGCCGGCTTCGCGCGGCTGCAGGCGGCCGGCATCGCGGTCGCCGCCGGCCTGATGG
AGGGGCAGGCACGGGATCTCAACCGCGGTTTCCTGTCGCGCTTCACCCGCGGCCGGCCCTGGCTGCGGGTCAAGCTTGCC
GCCAGCCTCGACGGCCGCACAGCGATGGCCAGCGGCGAGTCCAAGTGGATCACGGGCGAGGCCGCGCGCGCCGACGTGCA
GCGCTGGCGCGCACGCAGCGGGGCGATCCTGACCGGCGCCGACACCGTGCTGGCCGACGACCCGGCCCTGACCGTGCGCC
TGGGCGACGCCACCCCGTTCCAGCCACCGCTGCGGGTGGTGCTCGACAGCCGCCTGCGCAGCCTGGCCATGCCCAGGGTG
CGCGACGGCTCGGCGCCCACGCTTTACCTGCATGGCCCGGACGCGGTGCCGCCGCCGGGCCTGGATGCGGAGTTCGCCGT
CGTGCCGACGCGCGATGGCCACCTGGACCTGGAGTCCGCGCTGCGGCTTCTGGCAGGACGTGACATCAACGAGGTCCAGG
TCGAGGCCGGCCCGGCCCTGTGTGGGGCGTTGCTGCACGCCGGCCTGGTCGACGAGCTGCTGCTGTACCAGGCGCCGCTG
GTCCTGGGCGACACCGCGCGTCCGCTGTTCGCCGGGCTGGGGATCGAGGCCATGGCCCAGCGCCTGCGGCTGGAGCTGGT
CGAGGCGGCGATGGTCGGGGACGACCGCCGCCTGCTGCTGCGCCCGGCCCAGGCCTGA

Protein sequence :
MTTTFDAFDHACMARALQLAARGLYTARPNPVVGCVVAKDGAVVGEGWHPRAGEPHAEVFALREAGERARGATAYVTLEP
CAHHGRTPPCAEALVQAGVARVVAAMRDPFPRVDGAGFARLQAAGIAVAAGLMEGQARDLNRGFLSRFTRGRPWLRVKLA
ASLDGRTAMASGESKWITGEAARADVQRWRARSGAILTGADTVLADDPALTVRLGDATPFQPPLRVVLDSRLRSLAMPRV
RDGSAPTLYLHGPDAVPPPGLDAEFAVVPTRDGHLDLESALRLLAGRDINEVQVEAGPALCGALLHAGLVDELLLYQAPL
VLGDTARPLFAGLGIEAMAQRLRLELVEAAMVGDDRRLLLRPAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-62 50
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-62 50