Gene Information

Name : Psesu_0534 (Psesu_0534)
Accession : YP_004145623.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 591285 - 592010 bp
Length : 726 bp
Strand : -
Note : TIGRFAM: ribonuclease PH; KEGG: xal:XALc_0795 hypothetical ribonuclease ph protein; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGACCGTCGTCCGCCCCAGTGGCCGCGCCCCCGACCAGCTGCGCCCCGTGCGCATCGAGCGCGGCTTCACCCGCCACGC
CGAAGGCTCCGTGCTCGTCAGCTTCGGGGATACCCGGGTGCTGTGCACCGCCAGCATCGACAACAAGGTGCCGGCCTTCC
TGCGCGGCAAGGGCGAGGGCTGGGTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACCCATACCCGCTCCGACCGCGAG
GCCGCGCGTGGCAAGCAGGGCGGACGCACCCTGGAGATCCAGCGCCTGATCGGCCGCACCCTGCGCGCCTGCATCGACCG
CGGCGCCCTGGGCGAGCGCACCATCACCTTGGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCACCGCCGCCATCA
CCGGTGCCTACGTGGCCCTGGTCGATGCCGTGCGCTGGCTGCAGGGCCGCGGCGAGATCAAGCGCGATCCGGTGTTCGGC
GCGGTGGCCGCGGTCTCGGTCGGCGTGTACAGGGGCGTGCCGGTGCTGGACCTGGACTACGCCGAGGACAGCGACTGCGA
CACCGACATGAACGTGGTCATGAACGACGGCGGCGGCTTCATCGAACTGCAGGGCACGGCCGAGGGCCATGCCTTCCGCC
GCGACGAGCTGGACGCGCTGCTGGCCCTGGCCGAAACCGGCATCGGCCAGCTGCTGGAGCTGCAGCGCCAGGCGCTGGCC
GGCTGA

Protein sequence :
MTVVRPSGRAPDQLRPVRIERGFTRHAEGSVLVSFGDTRVLCTASIDNKVPAFLRGKGEGWVTAEYGMLPRSTHTRSDRE
AARGKQGGRTLEIQRLIGRTLRACIDRGALGERTITLDCDVLQADGGTRTAAITGAYVALVDAVRWLQGRGEIKRDPVFG
AVAAVSVGVYRGVPVLDLDYAEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELDALLALAETGIGQLLELQRQALA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-54 61