Gene Information

Name : Psesu_2997 (Psesu_2997)
Accession : YP_004148051.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 3283848 - 3285014 bp
Length : 1167 bp
Strand : +
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: slt:Slit_1377 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAGATCGCTATCGCCGGAACCGGCTACGTGGGCCTCTCCAACGCCATCCTGCTTGCTCAGAACCATACCGTCGTCGC
CCTGGACATCGATGCAGCCAAGGTCGAAATGCTCAACCGTGGGCAGTCGCCGATCGACGACGCCGAGATCCAGCAGTACC
TCTCGGAGAAGAAGCTCGACTTCCGTGCGACCCTGGATAAGCGCGAAGCCTACGAAGGCGCCGACTTCGTCATCATCGCC
ACCCCCACCGACTACGATCCGGAAACCAACTACTTCAACACAGGCTCGGTCGAGTCGGTGATCCGCGACGTGGTGGCCAT
CAACCCGAGCGCCACGATGGTCATCAAGTCGACCATCCCGGTCGGCTTCACCGTGGGCGCCCGCCAGAAGTACGGCACCA
CCAACGTGATTTTCTCGCCCGAGTTCCTGCGCGAGGGCCGTGCGCTGTACGACAACCTGCATCCCAGCCGCATCATCGTC
GGCGAGCGCTCCGAGCGCGCCGAGACCTTCGCGAACCTGCTGCAGGAAGGCGCCATCAAGAAGGACTCCCCGGTCCTGTT
TACCGACTCCACCGAGGCCGAGGCGATCAAGCTGTTTGCCAACACCTACCTGGCCATGCGTGTTGCATTCTTCAACGAGC
TCGACACCTACGCCTGCACCCACGGCCTGGACACCCGCCAGATCATCGAGGGCGTGAGCCTGGACCCACGCGTCGGCGGC
CACTACAACAACCCCAGCTTCGGCTACGGCGGCTACTGCCTGCCGAAGGACACCAAGCAGCTGCTGGCCAACTACAACGA
CGTCCCGCAGAACCTGATCCGCGCGATCGTCGATTCCAATACCACCCGCAAGGACTTCATCGCCCGCGACGTCCTGCGTC
GCGAACCAAAGGTCGTCGGCGTGTACCGCCTGATCATGAAGGCCGGCTCGGACAATTTCCGCGCCTCGAGCGTGCAGGGC
ATCATGAAGCGCATCAAGGCCAAGGGCGTTGAAGTCATCGTGTACGAACCGGTCGTCAAGGACACCGAGTTCTTCCACTC
GCGCGTGGTCAACGACCTGCAGGAGTTCAAGAAGCAGGCGGACGTCATCATCGCCAACCGCATTACCGACGACATCCGCG
ATGTCGCCAACAAGGTCTATAGCCGCGACCTGTTCGGCTCCGACTGA

Protein sequence : 
MKIAIAGTGYVGLSNAILLAQNHTVVALDIDAAKVEMLNRGQSPIDDAEIQQYLSEKKLDFRATLDKREAYEGADFVIIA
TPTDYDPETNYFNTGSVESVIRDVVAINPSATMVIKSTIPVGFTVGARQKYGTTNVIFSPEFLREGRALYDNLHPSRIIV
GERSERAETFANLLQEGAIKKDSPVLFTDSTEAEAIKLFANTYLAMRVAFFNELDTYACTHGLDTRQIIEGVSLDPRVGG
HYNNPSFGYGGYCLPKDTKQLLANYNDVPQNLIRAIVDSNTTRKDFIARDVLRREPKVVGVYRLIMKAGSDNFRASSVQG
IMKRIKAKGVEVIVYEPVVKDTEFFHSRVVNDLQEFKKQADVIIANRITDDIRDVANKVYSRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 5e-92 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_2997 YP_004148051.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-104 56