Gene Information

Name : Psesu_2462 (Psesu_2462)
Accession : YP_004147525.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2703355 - 2704539 bp
Length : 1185 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: sml:Smlt0617 cystathionine beta/gamma-lyase

DNA sequence :
ATGACCGACCAGTCCTCCCGCGACGGCCTGCATCCGGACGCCCTCGCGTTCGCCACCCTGGCCATCCATGGTGGGCAGTC
GCCCGACCCGTCCACCGGCGCGGTCATGCCGCCGATCTACGCCACCTCGACCTACGCGCAGTCGGCGCCGGGCGAGCACC
AGGGCTTCGAATACTCCCGCACCCACAACCCGACCCGGTTCGCCTGGGAGCGCTGCGTCGCGGCGCTGGAAGGCGGCAGC
CGCGGCTTCGCCTTCGCCTCGGGCATGGCGGCCACCTCCACCGTGCTGGAGCTGCTGGACAGCGGCGACCATGTGGTGGC
GATGGACGACCTCTACGGCGGCAGCTACCGCCTGTTCGAGCGCGTGCGCCGGCGCAGCGCGGCGCTGGACTTCAGCTTCG
TCGACCTGGCCGACCTGGACGCATTCGCCGCGGCGATCACCCCGCGCACCCGCATGGTCTGGATCGAGACCCCGACCAAC
CCGATGCTGAAGATCGTCGACATCGCCGCGGTCGCGGAGATCGCGCACCGCCACGGCCTGCTGGTGGTGGTCGACAACAC
CTTCGCCTCGCCGGCCCTGCAGCGCCCGCTGGCGCTGGGCGCCGACCTGGTCCTGCACTCGGCGACCAAGTACCTCAACG
GCCACTCCGACATGGTTGGTGGCGTGGTGGTGACCGCCGACGCGGAGCTGGGCGAGCGCATGGCCTTCCTGCAGAACTCG
GTGGGCGCGGTGCAGGGGCCGTTCGACAGCTTCCTGGCCCTGCGCGGCGCCAAGACCCTGCCGCTGCGCATGCGCGCCCA
CTGCGCCAACGCCCTGGAGCTGGCGCGCTGGCTGGAATCGCACCCGAAGGTCGGGAAGGTGATCTACCCGGGCCTGGAGT
CGCACCCGCAACACGGGCTGGCGACGCGGCAGATGTCAGGCTCCGGCGGCATCGTCTCGGTGGTGCTCAAGGGCGGCTTC
GAGGCGGCCAGCCGCTTCTGCGCCCGCACGAAGCTGTTCACCCTGGCCGAGTCGCTGGGCGGCGTTGAAAGCCTGCTCAA
CCACCCGGCGGTGATGACCCACGCCTCGGTGCCGGTCGAGCGCCGCGCGCGCCTGGGCATCAGCGATTCGCTGGTGCGCC
TGAGCGTCGGCATCGAGGACCTCGAGGACCTGCGCAAGGACCTGGACCAGGCACTGGCCGGCTGA

Protein sequence :
MTDQSSRDGLHPDALAFATLAIHGGQSPDPSTGAVMPPIYATSTYAQSAPGEHQGFEYSRTHNPTRFAWERCVAALEGGS
RGFAFASGMAATSTVLELLDSGDHVVAMDDLYGGSYRLFERVRRRSAALDFSFVDLADLDAFAAAITPRTRMVWIETPTN
PMLKIVDIAAVAEIAHRHGLLVVVDNTFASPALQRPLALGADLVLHSATKYLNGHSDMVGGVVVTADAELGERMAFLQNS
VGAVQGPFDSFLALRGAKTLPLRMRAHCANALELARWLESHPKVGKVIYPGLESHPQHGLATRQMSGSGGIVSVVLKGGF
EAASRFCARTKLFTLAESLGGVESLLNHPAVMTHASVPVERRARLGISDSLVRLSVGIEDLEDLRKDLDQALAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 53
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-81 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-56 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_2462 YP_004147525.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 9e-66 47