Gene Information

Name : Psesu_2423 (Psesu_2423)
Accession : YP_004147486.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2661223 - 2662203 bp
Length : 981 bp
Strand : -
Note : KEGG: xca:xccb100_3700 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase

DNA sequence :
GTGAGCGCAAGGCCACGCACCCCGGCCGAGCGCCGCGAACTGGCGATGTCCCTGCCGCCGCTGCGCGAGGACGACGCGCG
CGCCATCGCCCGCTTCCTCGACGCCACCTGGGCCGAGCGCGGCCTGGCCCGGGCCAGCCTGGACGCCTACCGCCGCGACC
TGGAACTGCTGGCGCGCTGGCGCGACGGCACTGGTGGCGGGCTGGTGGGTGCCGATCGCGAAGCCCTGTTCGGCTACCTG
GCCTGGCGCGCGGGACATGGCTACGGCCCGCGCAGCAATGCCCGGCTGCGTGCCTGCCTGCGCGCGTTCTATGCGCACCT
GGTCCTGGCCGGCGTGCGCCAGGACGATCCGGCCGCGCTGATCGACCCGCCGCGGATGCCGCGGCCACTGCCGAAGGCCA
TGTCGGAGTCGCAGGTCGAGGCCCTGCTGGGGGTGCCGGACGTGTCCATCCCGGAAGGCCTGCGCGACCGTGCCATGCTC
GAGCTGATGTATGCCGCCGGCCTGCGCGTGAGCGAGCTGGTCAACCTGCCGGCCAACGCGGTGAACCTGCGCCAGGGGGT
GGTCCGGGTACGCGGCAAGGGCTCCAAGGAGCGGCTGGTGCCGCTGGGCGAGGAGTCCCAGGACTGGCTGGAACGCTACC
TGCGGGAGTCGCGCCCGGCGCTGACCGGCGGTCGCCCGGTGCCGGCCGATGCCAGCGGCGAGGTGCCGCTGTTCATTGGC
GCCAGCCGCAGCGCGCCCACCCGCCAGGACTTCTGGCGGGCGATCAAGCGCCACGCCGCCGCCGCCGGGATCGACCCGCG
CACGGTGACCCCGCACGGCCTGCGCCACAGCTTCGCCACCCACCTGCTCAACCACGGCGCCGACCTGCGCGCGCTGCAGC
TGCTGCTGGGCCACGCCAGCCTGTCCACCACCCAGATCTACACCCTGGTCGCGCGCGAGCACCTGCAGCGCCTGCACGCC
AGGCACCACCCGAGGGGGTGA

Protein sequence :
MSARPRTPAERRELAMSLPPLREDDARAIARFLDATWAERGLARASLDAYRRDLELLARWRDGTGGGLVGADREALFGYL
AWRAGHGYGPRSNARLRACLRAFYAHLVLAGVRQDDPAALIDPPRMPRPLPKAMSESQVEALLGVPDVSIPEGLRDRAML
ELMYAAGLRVSELVNLPANAVNLRQGVVRVRGKGSKERLVPLGEESQDWLERYLRESRPALTGGRPVPADASGEVPLFIG
ASRSAPTRQDFWRAIKRHAAAAGIDPRTVTPHGLRHSFATHLLNHGADLRALQLLLGHASLSTTQIYTLVAREHLQRLHA
RHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 53